Slot: name

Globally unique identifier for the entity.

URI: schema:name

Applicable Classes

Name	Description	Modifies Slot
BrainAtlas	A schema for representing a version of a brain atlas	no
CommonCoordinateSpace	A schema for representing a version of a common coordinate space	no
ParcellationEntity	A schema for representing a parcellation entity, which is an anatomical locat…	no
DBSProtocol	A protocol describing DBS therapy, potentially bilateral or multi-lead	no
SoftwarePackage	Identity and metadata for a software package, aligned with schema	no
SoftwareRequirement	An individual software requirement binding a package to a version constraint …	no
SoftwareEnvironment	A reproducible software environment aggregating one or more SoftwareRequireme…	no
Event	A discrete or continuous event that modifies the system during simulation	no
Tractogram	Reference to tractography/diffusion MRI data used to derive structural connec…	no
GraphGenerator	Backend-agnostic graph generator specification	no
Binding	Per-backend construction binding for a GraphGenerator: how to build the graph…	no
ProcedureStep	A single named step (or output) in a Procedure, carrying the Equation that de…	no
File		no
StateValue	A named state variable value for per-node initialization	no
Observation	Unified class for all observation/measurement specifications	no
Dynamics		yes
StateVariable		no
Distribution	A probability distribution for sampling parameters or initial conditions	yes
Parameter		no
CouplingInput	Specification of a coupling input channel for multi-coupling dynamics	no
Argument	A function argument with explicit value specification	no
Function	A function with explicit input -> transformation -> output flow	no
Callable		no
DerivedParameter		no
DerivedVariable		no
DataSource	Specification for loading external/empirical data	no
OptimizationStage	A single stage in a multi-stage optimization workflow	no
Exploration	Parameter space exploration (grid search, sweep)	no
Inference	Bayesian inference of model parameters from an observation, via MCMC	no
Prior	Prior belief over one inferred parameter	no
Likelihood	Observation model for Bayesian inference: p(data	sim(theta))
UpdateRule	Defines how a parameter is updated based on observables	no
Algorithm	A complete specification of an iterative parameter tuning algorithm	no
Option	A toolkit-specific key-value option (string name + string value)	yes
BranchSwitch	Specification for switching from a detected bifurcation point to a new branch…	no
Continuation	Complete specification of a numerical continuation / bifurcation analysis	no
Coupling		yes
ClinicalScale	A clinical assessment inventory or structured scale composed of multiple scor…	no
ClinicalScore	Metadata about a clinical score or scale	no
SimulationTool	A software tool for computational neuroscience simulation, analysis, or model…	no
MeasureSpec	Metadata for one phenotype measure	no
NamedArray	A named numeric array	no
LossFunction	A loss function for optimization with optional aggregation	no
FunctionCall	Invocation of a function in a pipeline	no
ClassReference	Reference to a class that can be instantiated and called	no
Optimization	Configuration for parameter optimization	no
FieldStateVariable		no

Properties

Type and Range

Property	Value
Range	xsd:string
Domain Of	BrainAtlas, CommonCoordinateSpace, ParcellationEntity, DBSProtocol, ClinicalScale, ClinicalScore, SoftwarePackage, SoftwareRequirement, SoftwareEnvironment, Event, Tractogram, MeasureSpec, NamedArray, GraphGenerator, Binding, ProcedureStep, File, StateValue, Observation, Dynamics, StateVariable, Distribution, Parameter, CouplingInput, Argument, Function, FunctionCall, Callable, DerivedParameter, DerivedVariable, DataSource, OptimizationStage, Exploration, Inference, Prior, Likelihood, UpdateRule, Algorithm, Option, BranchSwitch, Continuation, Coupling
Slot URI	schema:name

Cardinality and Requirements

Property	Value
Required	Yes

Slot Characteristics

Property	Value
Identifier	Yes

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/tvbo/common

Mappings

Mapping Type	Mapped Value
self	schema:name
native	tvbo:name

LinkML Source

name: name
description: Globally unique identifier for the entity.
from_schema: https://w3id.org/tvbo/common
slot_uri: schema:name
identifier: true
domain_of:
- BrainAtlas
- CommonCoordinateSpace
- ParcellationEntity
- DBSProtocol
- ClinicalScale
- ClinicalScore
- SoftwarePackage
- SoftwareRequirement
- SoftwareEnvironment
- Event
- Tractogram
- MeasureSpec
- NamedArray
- GraphGenerator
- Binding
- ProcedureStep
- File
- StateValue
- Observation
- Dynamics
- StateVariable
- Distribution
- Parameter
- CouplingInput
- Argument
- Function
- FunctionCall
- Callable
- DerivedParameter
- DerivedVariable
- DataSource
- OptimizationStage
- Exploration
- Inference
- Prior
- Likelihood
- UpdateRule
- Algorithm
- Option
- BranchSwitch
- Continuation
- Coupling
range: string
required: true