Class: Stimulus

URI: tvbo:Stimulus

 classDiagram
    class Stimulus
    click Stimulus href "./Stimulus.html"
      Stimulus : dataLocation
        
          
    
        
        
        Stimulus --> "0..1" String : dataLocation
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Stimulus : description
        
          
    
        
        
        Stimulus --> "0..1" String : description
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Stimulus : duration
        
          
    
        
        
        Stimulus --> "0..1" Float : duration
        click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
    

        
      Stimulus : equation
        
          
    
        
        
        Stimulus --> "0..1" Equation : equation
        click Equation href "./Equation.html"
    

        
      Stimulus : label
        
          
    
        
        
        Stimulus --> "0..1" String : label
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Stimulus : noise
        
          
    
        
        
        Stimulus --> "0..1" Noise : noise
        click Noise href "./Noise.html"
    

        
      Stimulus : parameters
        
          
    
        
        
        Stimulus --> "*" Parameter : parameters
        click Parameter href "./Parameter.html"
    

        
      Stimulus : regions
        
          
    
        
        
        Stimulus --> "*" Integer : regions
        click Integer href "../http://www.w3.org/2001/XMLSchema#integer.html"
    

        
      Stimulus : weighting
        
          
    
        
        
        Stimulus --> "*" Float : weighting
        click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
    

        
      

Class Properties

Property	Value
Class URI	tvbo:Stimulus

Slots

Name	Cardinality and Range	Description	Inheritance
equation	0..1 Equation		direct
parameters	* Parameter		direct
description	0..1 xsd:string		direct
dataLocation	0..1 xsd:string	Add the location of the data file containing the parcellation terminology	direct
duration	0..1 xsd:float		direct
label	0..1 xsd:string		direct
regions	* xsd:integer		direct
weighting	* xsd:float		direct
noise	0..1 Noise	Optional stochastic contribution to the stimulus	direct

Usages

used by	used in	type	used
Dynamics	stimulus	range	Stimulus
SimulationExperiment	stimulation	range	Stimulus

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/tvbo

Mappings

Mapping Type	Mapped Value
self	tvbo:Stimulus
native	tvbo:Stimulus

LinkML Source

Direct

name: Stimulus
from_schema: https://w3id.org/tvbo
slots:
- equation
- parameters
- description
- dataLocation
- duration
- label
attributes:
  regions:
    name: regions
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - Stimulus
    range: integer
    multivalued: true
  weighting:
    name: weighting
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - Stimulus
    range: float
    multivalued: true
  noise:
    name: noise
    description: Optional stochastic contribution to the stimulus. Mirrors state_variables.noise
      on the Dynamics side. The stimulus value at each integration step is the sum
      of `equation`'s evaluation (deterministic, if set) and a draw from this Noise
      process. When only `noise` is set and `equation` is absent, the stimulus IS
      the noise (pure stochastic source — e.g. iid uniform driver for memory-capacity
      benchmarks; signal+noise paradigms for psychophysics).
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - Stimulus
    - StateVariable
    - Integrator
    range: Noise
    required: false
    inlined: true
class_uri: tvbo:Stimulus

Induced

name: Stimulus
from_schema: https://w3id.org/tvbo
attributes:
  regions:
    name: regions
    from_schema: https://w3id.org/tvbo
    rank: 1000
    owner: Stimulus
    domain_of:
    - Stimulus
    range: integer
    multivalued: true
  weighting:
    name: weighting
    from_schema: https://w3id.org/tvbo
    rank: 1000
    owner: Stimulus
    domain_of:
    - Stimulus
    range: float
    multivalued: true
  noise:
    name: noise
    description: Optional stochastic contribution to the stimulus. Mirrors state_variables.noise
      on the Dynamics side. The stimulus value at each integration step is the sum
      of `equation`'s evaluation (deterministic, if set) and a draw from this Noise
      process. When only `noise` is set and `equation` is absent, the stimulus IS
      the noise (pure stochastic source — e.g. iid uniform driver for memory-capacity
      benchmarks; signal+noise paradigms for psychophysics).
    from_schema: https://w3id.org/tvbo
    rank: 1000
    owner: Stimulus
    domain_of:
    - Stimulus
    - StateVariable
    - Integrator
    range: Noise
    required: false
    inlined: true
  equation:
    name: equation
    from_schema: https://w3id.org/tvbo
    rank: 1000
    slot_uri: tvbo:Equation
    owner: Stimulus
    domain_of:
    - Stimulus
    - Event
    - ProcedureStep
    - Observation
    - StateVariable
    - Parameter
    - Function
    - FunctionCall
    - Case
    - DerivedParameter
    - DerivedVariable
    - Noise
    - UpdateRule
    - DifferentialOperator
    range: Equation
    inlined: true
  parameters:
    name: parameters
    from_schema: https://w3id.org/tvbo
    rank: 1000
    owner: Stimulus
    domain_of:
    - Equation
    - Stimulus
    - Event
    - TemporalApplicableEquation
    - Network
    - GraphGenerator
    - Node
    - Edge
    - Observation
    - Analysis
    - Dynamics
    - Distribution
    - Noise
    - Exploration
    - Discretization
    - BranchSwitch
    - Integrator
    - Coupling
    - PDE
    range: Parameter
    multivalued: true
    inlined: true
  description:
    name: description
    from_schema: https://w3id.org/tvbo
    rank: 1000
    slot_uri: dcterms:description
    owner: Stimulus
    domain_of:
    - Dataset
    - ClinicalScore
    - SoftwarePackage
    - SoftwareRequirement
    - SoftwareEnvironment
    - Equation
    - Stimulus
    - Event
    - Tractogram
    - Matrix
    - Phenotype
    - MeasureSpec
    - NamedArray
    - Network
    - GraphGenerator
    - ProcedureStep
    - File
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - CouplingInput
    - Argument
    - Function
    - FunctionCall
    - Callable
    - DerivedParameter
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - ExplorationAxis
    - FreeParameter
    - Inference
    - Prior
    - Likelihood
    - UpdateRule
    - AlgorithmStage
    - TuningObjective
    - Algorithm
    - BranchSwitch
    - Continuation
    - Integrator
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - Study
    - TimeSeries
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
  dataLocation:
    name: dataLocation
    description: Add the location of the data file containing the parcellation terminology.
    from_schema: https://openminds.ebrains.eu/sands/BrainAtlas
    owner: Stimulus
    domain_of:
    - ParcellationTerminology
    - SoftwareRequirement
    - SoftwareEnvironment
    - Stimulus
    - Event
    - Matrix
    - Dynamics
    - RandomStream
    - RegionMapping
    - TimeSeries
    - NDArray
    - Mesh
    range: string
  duration:
    name: duration
    from_schema: https://w3id.org/tvbo
    rank: 1000
    ifabsent: float(1000)
    owner: Stimulus
    domain_of:
    - Stimulus
    - Event
    - InitialState
    - Integrator
    range: float
  label:
    name: label
    from_schema: https://w3id.org/tvbo
    rank: 1000
    slot_uri: rdfs:label
    owner: Stimulus
    domain_of:
    - ParcellationTerminology
    - Subject
    - Session
    - Dataset
    - Contact
    - SoftwareEnvironment
    - Equation
    - Stimulus
    - Event
    - Parcellation
    - Tractogram
    - Matrix
    - Phenotype
    - Network
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - Function
    - FunctionCall
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - ExplorationAxis
    - FreeParameter
    - Inference
    - AlgorithmStage
    - TuningObjective
    - Continuation
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - SimulationStudy
    - TimeSeries
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - DifferentialOperator
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
class_uri: tvbo:Stimulus