Class: Tractogram

Reference to tractography/diffusion MRI data used to derive structural connectivity

 classDiagram
    class Tractogram
    click Tractogram href "./Tractogram.html"
      Tractogram : acquisition
        
          
    
        
        
        Tractogram --> "0..1" String : acquisition
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Tractogram : data_source
        
          
    
        
        
        Tractogram --> "0..1" String : data_source
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Tractogram : description
        
          
    
        
        
        Tractogram --> "0..1" String : description
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Tractogram : label
        
          
    
        
        
        Tractogram --> "0..1" String : label
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Tractogram : name
        
          
    
        
        
        Tractogram --> "1" String : name
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Tractogram : number_of_subjects
        
          
    
        
        
        Tractogram --> "0..1" Integer : number_of_subjects
        click Integer href "../http://www.w3.org/2001/XMLSchema#integer.html"
    

        
      Tractogram : processing_pipeline
        
          
    
        
        
        Tractogram --> "0..1" String : processing_pipeline
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Tractogram : reference
        
          
    
        
        
        Tractogram --> "0..1" String : reference
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"

Slots

Name	Cardinality and Range	Description	Inheritance
name	1 xsd:string		direct
label	0..1 xsd:string		direct
description	0..1 xsd:string		direct
data_source	0..1 xsd:string	Path or URI to the tractography data file	direct
number_of_subjects	0..1 xsd:integer	Number of subjects in the tractography dataset	direct
acquisition	0..1 xsd:string	Acquisition protocol or scanner information	direct
processing_pipeline	0..1 xsd:string	Processing pipeline used to generate the tractography	direct
reference	0..1 xsd:string	Publication or DOI reference for this tractography dataset	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/tvbo

Mappings

Mapping Type	Mapped Value
self	tvbo:Tractogram
native	tvbo:Tractogram

LinkML Source

Direct

name: Tractogram
description: Reference to tractography/diffusion MRI data used to derive structural
  connectivity
from_schema: https://w3id.org/tvbo
slots:
- name
- label
- description
attributes:
  data_source:
    name: data_source
    description: Path or URI to the tractography data file
    from_schema: https://w3id.org/tvbo
    domain_of:
    - Parcellation
    - Tractogram
    - Observation
    range: string
  number_of_subjects:
    name: number_of_subjects
    description: Number of subjects in the tractography dataset
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - Tractogram
    range: integer
  acquisition:
    name: acquisition
    description: Acquisition protocol or scanner information
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - Tractogram
    range: string
  processing_pipeline:
    name: processing_pipeline
    description: Processing pipeline used to generate the tractography
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - Tractogram
    range: string
  reference:
    name: reference
    description: Publication or DOI reference for this tractography dataset
    from_schema: https://w3id.org/tvbo
    domain_of:
    - ClinicalScale
    - ClinicalScore
    - Tractogram
    range: string
class_uri: tvbo:Tractogram

Induced

name: Tractogram
description: Reference to tractography/diffusion MRI data used to derive structural
  connectivity
from_schema: https://w3id.org/tvbo
attributes:
  data_source:
    name: data_source
    description: Path or URI to the tractography data file
    from_schema: https://w3id.org/tvbo
    alias: data_source
    owner: Tractogram
    domain_of:
    - Parcellation
    - Tractogram
    - Observation
    range: string
  number_of_subjects:
    name: number_of_subjects
    description: Number of subjects in the tractography dataset
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: number_of_subjects
    owner: Tractogram
    domain_of:
    - Tractogram
    range: integer
  acquisition:
    name: acquisition
    description: Acquisition protocol or scanner information
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: acquisition
    owner: Tractogram
    domain_of:
    - Tractogram
    range: string
  processing_pipeline:
    name: processing_pipeline
    description: Processing pipeline used to generate the tractography
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: processing_pipeline
    owner: Tractogram
    domain_of:
    - Tractogram
    range: string
  reference:
    name: reference
    description: Publication or DOI reference for this tractography dataset
    from_schema: https://w3id.org/tvbo
    alias: reference
    owner: Tractogram
    domain_of:
    - ClinicalScale
    - ClinicalScore
    - Tractogram
    range: string
  name:
    name: name
    from_schema: https://w3id.org/tvbo
    rank: 1000
    key: true
    alias: name
    owner: Tractogram
    domain_of:
    - BrainAtlas
    - CommonCoordinateSpace
    - ParcellationEntity
    - DBSProtocol
    - ClinicalScale
    - ClinicalScore
    - Tractogram
    - File
    - Observation
    - Dynamics
    - StateVariable
    - Distribution
    - Parameter
    - CouplingInput
    - Argument
    - Function
    - Callable
    - DerivedParameter
    - DerivedVariable
    - DataSource
    - OptimizationStage
    - Exploration
    - UpdateRule
    - Algorithm
    - Coupling
    - SoftwareEnvironment
    - SoftwareRequirement
    - SoftwarePackage
    range: string
    required: true
  label:
    name: label
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: label
    owner: Tractogram
    domain_of:
    - ParcellationTerminology
    - Dataset
    - Contact
    - Equation
    - Stimulus
    - Parcellation
    - Tractogram
    - Matrix
    - Network
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - Function
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - TuningObjective
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - SimulationStudy
    - TimeSeries
    - SoftwareEnvironment
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - DifferentialOperator
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
  description:
    name: description
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: description
    owner: Tractogram
    domain_of:
    - ClinicalScore
    - Equation
    - Stimulus
    - Tractogram
    - Matrix
    - Network
    - File
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - CouplingInput
    - Argument
    - Function
    - Callable
    - DerivedParameter
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - UpdateRule
    - TuningObjective
    - Algorithm
    - Integrator
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - SimulationStudy
    - TimeSeries
    - SoftwareEnvironment
    - SoftwareRequirement
    - SoftwarePackage
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
class_uri: tvbo:Tractogram