classDiagram
class Panel
click Panel href "./Panel.html"
Panel : annotations
Panel --> "*" Annotation : annotations
click Annotation href "./Annotation.html"
Panel : aspect
Panel --> "0..1" String : aspect
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : box_aspect
Panel --> "0..1" Float : box_aspect
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : camera
Panel --> "0..1" Camera : camera
click Camera href "./Camera.html"
Panel : capture
Panel --> "0..1" RenderSpec : capture
click RenderSpec href "./RenderSpec.html"
Panel : cell
Panel --> "0..1" Inset : cell
click Inset href "./Inset.html"
Panel : cells
Panel --> "*" Inset : cells
click Inset href "./Inset.html"
Panel : colorbar
Panel --> "0..1" Colorbar : colorbar
click Colorbar href "./Colorbar.html"
Panel : description
Panel --> "0..1" String : description
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : fill_cell
Panel --> "0..1" Boolean : fill_cell
click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
Panel : frame
Panel --> "0..1" Boolean : frame
click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
Panel : grid
Panel --> "0..1" Grid : grid
click Grid href "./Grid.html"
Panel : hide_xticklabels
Panel --> "0..1" Boolean : hide_xticklabels
click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
Panel : hide_yticklabels
Panel --> "0..1" Boolean : hide_yticklabels
click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
Panel : insets
Panel --> "*" Inset : insets
click Inset href "./Inset.html"
Panel : invert_x
Panel --> "0..1" Boolean : invert_x
click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
Panel : invert_y
Panel --> "0..1" Boolean : invert_y
click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
Panel : invert_z
Panel --> "0..1" Boolean : invert_z
click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
Panel : kind
Panel --> "1" PanelKind : kind
click PanelKind href "../../enums/PanelKind.html"
Panel : label
Panel --> "0..1" String : label
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : layers
Panel --> "*" Layer : layers
click Layer href "./Layer.html"
Panel : legend
Panel --> "0..1" Legend : legend
click Legend href "./Legend.html"
Panel : nbins
Panel --> "0..1" Integer : nbins
click Integer href "../http://www.w3.org/2001/XMLSchema#integer.html"
Panel : network
Panel --> "0..1" Graph : network
click Graph href "./Graph.html"
Panel : number
Panel --> "0..1" String : number
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : number_loc
Panel --> "0..1" Corner : number_loc
click Corner href "../../enums/Corner.html"
Panel : opts
Panel --> "*" Argument : opts
click Argument href "./Argument.html"
Panel : panel_key
Panel --> "1" String : panel_key
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : path
Panel --> "0..1" String : path
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : placeholder
Panel --> "0..1" String : placeholder
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : regions
Panel --> "*" Region : regions
click Region href "./Region.html"
Panel : render
Panel --> "0..1" String : render
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : rules
Panel --> "*" Rule : rules
click Rule href "./Rule.html"
Panel : source
Panel --> "0..1" String : source
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : surface
Panel --> "0..1" Surface : surface
click Surface href "./Surface.html"
Panel : tick_length
Panel --> "0..1" Float : tick_length
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : tick_prune
Panel --> "0..1" TickPrune : tick_prune
click TickPrune href "../../enums/TickPrune.html"
Panel : tick_size
Panel --> "0..1" Float : tick_size
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : title
Panel --> "0..1" String : title
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : triangle_gap
Panel --> "0..1" Integer : triangle_gap
click Integer href "../http://www.w3.org/2001/XMLSchema#integer.html"
Panel : volume
Panel --> "0..1" Volume : volume
click Volume href "./Volume.html"
Panel : xlabel
Panel --> "0..1" String : xlabel
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : xlabel_pad
Panel --> "0..1" Float : xlabel_pad
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : xlabel_side
Panel --> "0..1" AxisSide : xlabel_side
click AxisSide href "../../enums/AxisSide.html"
Panel : xlim
Panel --> "*" Float : xlim
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : xscale
Panel --> "0..1" AxisScale : xscale
click AxisScale href "../../enums/AxisScale.html"
Panel : xtick_format
Panel --> "0..1" TickFormat : xtick_format
click TickFormat href "../../enums/TickFormat.html"
Panel : xtick_rotation
Panel --> "0..1" Float : xtick_rotation
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : xtick_side
Panel --> "0..1" AxisSide : xtick_side
click AxisSide href "../../enums/AxisSide.html"
Panel : xticks
Panel --> "*" Float : xticks
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : ylabel
Panel --> "0..1" String : ylabel
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : ylabel_pad
Panel --> "0..1" Float : ylabel_pad
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : ylabel_side
Panel --> "0..1" AxisSide : ylabel_side
click AxisSide href "../../enums/AxisSide.html"
Panel : ylim
Panel --> "*" Float : ylim
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : yscale
Panel --> "0..1" AxisScale : yscale
click AxisScale href "../../enums/AxisScale.html"
Panel : ytick_format
Panel --> "0..1" TickFormat : ytick_format
click TickFormat href "../../enums/TickFormat.html"
Panel : ytick_rotation
Panel --> "0..1" Float : ytick_rotation
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : ytick_side
Panel --> "0..1" AxisSide : ytick_side
click AxisSide href "../../enums/AxisSide.html"
Panel : yticks
Panel --> "*" Float : yticks
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : zlabel
Panel --> "0..1" String : zlabel
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
Panel : zlabel_pad
Panel --> "0..1" Float : zlabel_pad
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Panel : zlim
Panel --> "*" Float : zlim
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
Class: Panel
One cell of the figure. kind selects grammar (cartesian/heatmap) vs escape-hatch (image/custom); every kind shares the label, placeholder, legend and annotation machinery. Reuses label (human title).
URI: tvbo:class/Panel
Slots
| Name | Cardinality and Range | Description | Inheritance |
|---|---|---|---|
| label | 0..1 xsd:string |
direct | |
| description | 0..1 xsd:string |
The authored interpretive clause for this panel — the one part of its caption… | direct |
| cell | 0..1 Inset |
What every cell of a grid is: the kind they all draw, and the opts they sha… |
direct |
| cells | * Inset |
A grid’s cells stated one at a time, for a grid whose cells differ — a firs… |
direct |
| source | 0..1 xsd:string |
For an image panel, the producing artifact its committed path is rendered… |
direct |
| capture | 0..1 RenderSpec |
How to turn an image panel’s HTML/URL source into its path: the headles… |
direct |
| panel_key | 1 xsd:string |
Mosaic label this panel binds to (matches a letter in Figure | direct |
| kind | 1 PanelKind |
direct | |
| number_loc | 0..1 Corner |
Per-panel override of the figure’s panel_number_loc — e | direct |
| number | 0..1 xsd:string |
The panel letter to draw, overriding the mosaic key, or the string ‘false’ to… | direct |
| placeholder | 0..1 xsd:string |
Honest-placeholder text drawn when this panel’s data is missing or degenerate… | direct |
| layers | * Layer |
Marks sharing this panel’s axes (overlay) | direct |
| path | 0..1 xsd:string |
External image file (image kind) | direct |
| render | 0..1 xsd:string |
Name of a registered custom-panel callable fn(container, ax, **opts) (custom … | direct |
| opts | * Argument |
The keyword options of a custom callable, and of the kinds that carry their… |
direct |
| tick_size | 0..1 xsd:float |
Tick-label size in points, overriding the figure’s font_size for this panel… |
direct |
| tick_length | 0..1 xsd:float |
Length of this panel’s tick marks in points, overriding the theme’s | direct |
| tick_prune | 0..1 TickPrune |
Drop the first, last, or both end ticks, for the case where a corner tick col… | direct |
| nbins | 0..1 xsd:integer |
Upper bound on the number of ticks per axis | direct |
| xticks | * xsd:float |
The x tick positions, stated outright | direct |
| yticks | * xsd:float |
The y tick positions, stated outright | direct |
| hide_xticklabels | 0..1 xsd:boolean |
Draw the x ticks without their numbers | direct |
| hide_yticklabels | 0..1 xsd:boolean |
Draw the y ticks without their numbers | direct |
| xtick_rotation | 0..1 xsd:float |
Rotate the x tick labels, in degrees counter-clockwise | direct |
| ytick_rotation | 0..1 xsd:float |
Rotate the y tick labels, in degrees counter-clockwise | direct |
| xtick_format | 0..1 TickFormat |
How x tick numbers are written: sci forces scientific notation, plain for… |
direct |
| ytick_format | 0..1 TickFormat |
How y tick numbers are written | direct |
| xtick_side | 0..1 AxisSide |
Which edge the x ticks sit on | direct |
| ytick_side | 0..1 AxisSide |
Which edge the y ticks sit on | direct |
| xlabel | 0..1 xsd:string |
The x axis label, as the figure prints it — unit included, LaTeX included | direct |
| ylabel | 0..1 xsd:string |
The y axis label | direct |
| zlabel | 0..1 xsd:string |
The depth axis label of a 3-D panel | direct |
| title | 0..1 xsd:string |
A heading above the panel, in the panel’s own words | direct |
| xlabel_pad | 0..1 xsd:float |
Gap in points between the x axis label and its tick numbers, for where the de… | direct |
| ylabel_pad | 0..1 xsd:float |
Gap in points between the y axis label and its tick numbers | direct |
| zlabel_pad | 0..1 xsd:float |
Gap in points between the z axis label and its tick numbers | direct |
| xlabel_side | 0..1 AxisSide |
Which edge the x axis LABEL sits on | direct |
| ylabel_side | 0..1 AxisSide |
Which edge the y axis LABEL sits on | direct |
| xlim | * xsd:float |
The x range, [min, max] |
direct |
| ylim | * xsd:float |
The y range, [min, max] |
direct |
| zlim | * xsd:float |
The depth range of a 3-D panel, [min, max] |
direct |
| xscale | 0..1 AxisScale |
How the x axis maps values to distance | direct |
| yscale | 0..1 AxisScale |
How the y axis maps values to distance | direct |
| aspect | 0..1 xsd:string or xsd:float |
The DATA aspect ratio: equal — one unit of x is one unit of y, what a matri… |
direct |
| box_aspect | 0..1 xsd:float |
The frame’s height over its width, independent of the data ranges: a square p… | direct |
| invert_x | 0..1 xsd:boolean |
Draw the x axis descending | direct |
| invert_y | 0..1 xsd:boolean |
Draw the y axis descending — the matrix convention, row 0 at the top | direct |
| invert_z | 0..1 xsd:boolean |
Draw the depth axis of a 3-D panel descending | direct |
| frame | 0..1 xsd:boolean |
Whether the panel keeps its frame and its ticks | direct |
| legend | 0..1 Legend or xsd:boolean or xsd:string |
A key for this panel’s own marks | direct |
| colorbar | 0..1 Colorbar |
The colour scale printed beside this panel’s field | direct |
| surface | 0..1 Surface |
Geometry and colour scale of a kind: surface panel |
direct |
| volume | 0..1 Volume |
Geometry and colour scale of a kind: volume panel |
direct |
| network | 0..1 Graph |
Graph and colour scale of a kind: network panel |
direct |
| grid | 0..1 Grid |
How a kind: grid panel tiles its cells |
direct |
| fill_cell | 0..1 xsd:boolean |
Keep the position the layout engine gave this panel, rather than letting a la… | direct |
| triangle_gap | 0..1 xsd:integer |
Cells of blank left along the diagonal between two triangle layers, so the … |
direct |
| rules | * Rule |
Straight reference lines drawn across the panel: a zero, a threshold, the ide… | direct |
| regions | * Region |
Rectangles ringing the windows this panel calls out — the parameter band a re… | direct |
| camera | 0..1 Camera |
Viewpoint for a 3-D panel or a surface | direct |
| annotations | * Annotation |
Positioned text labels drawn on the panel (e | direct |
| insets | * Inset |
Sub-axes drawn inside this panel after its own body — the zoom windows, corne… | direct |
Usages
| used by | used in | type | used |
|---|---|---|---|
| Figure | panels | range | Panel |
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/tvbo/figure
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | tvbo:Panel |
| native | tvbo:Panel |
LinkML Source
Direct
name: Panel
description: One cell of the figure. kind selects grammar (cartesian/heatmap) vs escape-hatch
(image/custom); every kind shares the label, placeholder, legend and annotation
machinery. Reuses label (human title).
from_schema: https://w3id.org/tvbo/figure
slots:
- label
- description
- cell
- cells
- source
- capture
slot_usage:
description:
name: description
description: The authored interpretive clause for this panel — the one part of
its caption a human writes. The caption composer merges it with the structural
descriptor it derives from the panel's layers (axis quantities/units, model/experiment,
transform), so the sentence a reader sees is authored intent over computed fact
and cannot drift when panels move or layers change.
source:
name: source
description: 'For an `image` panel, the producing artifact its committed `path`
is rendered FROM: a committed HTML/SVG file, a producing script, or a URL. `path`
stays the placed output; `source` is what regenerates it deterministically,
so a schematic or a live-platform view is provenance-tracked rather than an
opaque binary pasted into the repo. Rendered through `capture:` when it is HTML/a
URL; run as a script otherwise.'
attributes:
panel_key:
name: panel_key
annotations:
collection_key:
tag: collection_key
value: true
description: Mosaic label this panel binds to (matches a letter in Figure.layout).
from_schema: https://w3id.org/tvbo/figure
rank: 1000
key: true
domain_of:
- Panel
range: string
kind:
name: kind
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: PanelKind
required: true
number_loc:
name: number_loc
description: Per-panel override of the figure's panel_number_loc — e.g. wide top
panels upper-right, grid panels upper-left.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
range: Corner
number:
name: number
description: 'The panel letter to draw, overriding the mosaic key, or the string
''false'' to draw none. Needed whenever the paper''s panels do not map one-to-one
onto mosaic cells: a row of five mode surfaces under a single (a), or a schematic
cell that carries no letter of its own. Without it a grouped figure numbers
every cell and its letters stop matching the paper''s.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
range: string
placeholder:
name: placeholder
description: Honest-placeholder text drawn when this panel's data is missing or
degenerate (never a source-replot). Setting it wraps the draw so a missing container
falls back to this label instead of erroring.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
range: string
layers:
name: layers
description: Marks sharing this panel's axes (overlay). Grammar kinds only.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: Layer
multivalued: true
inlined: true
inlined_as_list: true
path:
name: path
description: External image file (image kind).
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
- File
- DataSource
- CodeSource
- ArchiveConfig
range: string
render:
name: render
description: Name of a registered custom-panel callable fn(container, ax, **opts)
(custom kind).
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: string
opts:
name: opts
description: 'The keyword options of a `custom` callable, and of the kinds that
carry their own option family — a `surface`/`volume`/`network` panel''s geometry,
a colorbar''s. No part of how an axis is DRAWN belongs here: the labels, limits,
scales, shape and legend are slots on the panel itself, the tick family sits
beside them, and `rules`, `regions` and `camera` carry the marks that travel
with a colour. The renderer refuses a retired name here rather than passing
it into the emitted script, and names the slot that replaced it.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
- Style
range: Argument
multivalued: true
inlined: true
tick_size:
name: tick_size
description: Tick-label size in points, overriding the figure's `font_size` for
this panel's ticks alone.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
tick_length:
name: tick_length
description: Length of this panel's tick marks in points, overriding the theme's.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
- Theme
range: float
tick_prune:
name: tick_prune
description: Drop the first, last, or both end ticks, for the case where a corner
tick collides with its neighbour panel's.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: TickPrune
nbins:
name: nbins
description: Upper bound on the number of ticks per axis. The lever to reach for
when a dense mosaic runs its numbers together.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: integer
xticks:
name: xticks
description: The x tick positions, stated outright. Unset lets the locator choose
them.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
multivalued: true
yticks:
name: yticks
description: The y tick positions, stated outright.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
multivalued: true
hide_xticklabels:
name: hide_xticklabels
description: 'Draw the x ticks without their numbers. Declare `share_x` on the
figure alongside it: hiding the numbers alone asserts a shared scale the axes
may not have, and a reader then compares two panels drawn at different ranges.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: boolean
hide_yticklabels:
name: hide_yticklabels
description: Draw the y ticks without their numbers. Same rule as `hide_xticklabels`,
with `share_y`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: boolean
xtick_rotation:
name: xtick_rotation
description: 'Rotate the x tick labels, in degrees counter-clockwise. Worth reaching
for when a dense row would otherwise run its numbers together: a slanted label
is anchored at its tick rather than centred under it, so it costs width it would
otherwise steal from its neighbour.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
ytick_rotation:
name: ytick_rotation
description: Rotate the y tick labels, in degrees counter-clockwise.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
xtick_format:
name: xtick_format
description: 'How x tick numbers are written: `sci` forces scientific notation,
`plain` forbids it.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: TickFormat
ytick_format:
name: ytick_format
description: How y tick numbers are written.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: TickFormat
xtick_side:
name: xtick_side
description: Which edge the x ticks sit on.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: AxisSide
ytick_side:
name: ytick_side
description: Which edge the y ticks sit on.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: AxisSide
xlabel:
name: xlabel
description: 'The x axis label, as the figure prints it — unit included, LaTeX
included. Unset leaves the renderer''s own, which is the encoded field''s bare
name: right for a working figure, wrong for a printed one.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: string
ylabel:
name: ylabel
description: The y axis label. See `xlabel`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: string
zlabel:
name: zlabel
description: The depth axis label of a 3-D panel. Ignored by every flat kind.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: string
title:
name: title
description: A heading above the panel, in the panel's own words. A panel LETTER
is not a title — that is `number`, which the layout places and sizes to the
journal's convention.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
- Legend
- Study
range: string
xlabel_pad:
name: xlabel_pad
description: Gap in points between the x axis label and its tick numbers, for
where the default lets the two touch. Unset takes the theme's `label_pad`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
ylabel_pad:
name: ylabel_pad
description: Gap in points between the y axis label and its tick numbers. See
`xlabel_pad`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
zlabel_pad:
name: zlabel_pad
description: Gap in points between the z axis label and its tick numbers. See
`xlabel_pad`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
xlabel_side:
name: xlabel_side
description: Which edge the x axis LABEL sits on. The tick numbers stay where
`xtick_side` puts them, so a label can cross to the far side of a panel whose
ticks do not follow it.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: AxisSide
ylabel_side:
name: ylabel_side
description: Which edge the y axis LABEL sits on. See `xlabel_side`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: AxisSide
xlim:
name: xlim
description: The x range, `[min, max]`. Declared rather than inferred, because
two panels a figure asks the reader to compare must not end up on whatever ranges
their own data happened to reach.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
multivalued: true
ylim:
name: ylim
description: The y range, `[min, max]`. See `xlim`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
multivalued: true
zlim:
name: zlim
description: The depth range of a 3-D panel, `[min, max]`. Ignored by every flat
kind.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
multivalued: true
xscale:
name: xscale
description: How the x axis maps values to distance.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: AxisScale
yscale:
name: yscale
description: How the y axis maps values to distance.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: AxisScale
aspect:
name: aspect
description: 'The DATA aspect ratio: `equal` — one unit of x is one unit of y,
what a matrix or a spatial map needs — or `auto` to fill the cell, or a number.
`box_aspect` shapes the frame instead.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
- Colorbar
range: string
any_of:
- range: string
- range: float
box_aspect:
name: box_aspect
description: 'The frame''s height over its width, independent of the data ranges:
a square panel over data that is not square. `aspect` constrains the data instead.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: float
invert_x:
name: invert_x
description: Draw the x axis descending.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: boolean
invert_y:
name: invert_y
description: Draw the y axis descending — the matrix convention, row 0 at the
top.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: boolean
invert_z:
name: invert_z
description: Draw the depth axis of a 3-D panel descending.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: boolean
frame:
name: frame
description: 'Whether the panel keeps its frame and its ticks. `false` strips
both, for a panel with no measurable axis: an image, a schematic, a connectivity
matrix shown as a picture. Unset keeps them.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
- Layer
- Legend
range: boolean
legend:
name: legend
description: 'A key for this panel''s own marks. `legend: true` draws it wherever
the backend finds room, `legend: upper right` fixes the corner, and the object
form states the rest — frame, columns, title. All three are one slot, so a panel
that starts with a corner and later needs two columns keeps the word it had.
Distinct from `kind: legend`, a standalone legend PANEL that occupies a cell
of its own.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: Legend
inlined: true
any_of:
- range: Legend
- range: boolean
- range: string
colorbar:
name: colorbar
description: The colour scale printed beside this panel's field.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: Colorbar
inlined: true
surface:
name: surface
description: 'Geometry and colour scale of a `kind: surface` panel. Ignored by
every other kind.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: Surface
inlined: true
volume:
name: volume
description: 'Geometry and colour scale of a `kind: volume` panel. Ignored by
every other kind.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: Volume
inlined: true
network:
name: network
description: 'Graph and colour scale of a `kind: network` panel. Ignored by every
other kind.'
from_schema: https://w3id.org/tvbo/figure
domain_of:
- Subject
- Session
- Panel
- Inset
- SimulationExperiment
range: Graph
inlined: true
grid:
name: grid
description: 'How a `kind: grid` panel tiles its cells. Ignored by every other
kind.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: Grid
inlined: true
fill_cell:
name: fill_cell
description: Keep the position the layout engine gave this panel, rather than
letting a later pass move it. For a panel whose position carries meaning — aligned
with the one above it, or sized to match a sibling.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: boolean
triangle_gap:
name: triangle_gap
description: Cells of blank left along the diagonal between two `triangle` layers,
so the two halves of a split matrix read as two quantities rather than one image.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: integer
rules:
name: rules
description: 'Straight reference lines drawn across the panel: a zero, a threshold,
the identity line of a target-versus-simulated plot. Each carries its own colour
and dash, so a rule and the way it is drawn cannot be stated apart.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: Rule
multivalued: true
inlined: true
inlined_as_list: true
regions:
name: regions
description: Rectangles ringing the windows this panel calls out — the parameter
band a regime lives in, the interval a statistic was taken over.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
- Stimulus
range: Region
multivalued: true
inlined: true
inlined_as_list: true
camera:
name: camera
description: Viewpoint for a 3-D panel or a surface. Ignored by every flat kind.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: Camera
inlined: true
annotations:
name: annotations
description: Positioned text labels drawn on the panel (e.g. 'K≈272') — a declarative
alternative to a custom callable.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
- Inset
range: Annotation
multivalued: true
inlined: true
inlined_as_list: true
insets:
name: insets
description: Sub-axes drawn inside this panel after its own body — the zoom windows,
corner thumbnails and small key maps papers place over a plot. Declaring them
keeps a panel that needs one from becoming a custom callable, which would take
its whole interior out of the grammar.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
domain_of:
- Panel
range: Inset
multivalued: true
inlined: true
inlined_as_list: trueInduced
name: Panel
description: One cell of the figure. kind selects grammar (cartesian/heatmap) vs escape-hatch
(image/custom); every kind shares the label, placeholder, legend and annotation
machinery. Reuses label (human title).
from_schema: https://w3id.org/tvbo/figure
slot_usage:
description:
name: description
description: The authored interpretive clause for this panel — the one part of
its caption a human writes. The caption composer merges it with the structural
descriptor it derives from the panel's layers (axis quantities/units, model/experiment,
transform), so the sentence a reader sees is authored intent over computed fact
and cannot drift when panels move or layers change.
source:
name: source
description: 'For an `image` panel, the producing artifact its committed `path`
is rendered FROM: a committed HTML/SVG file, a producing script, or a URL. `path`
stays the placed output; `source` is what regenerates it deterministically,
so a schematic or a live-platform view is provenance-tracked rather than an
opaque binary pasted into the repo. Rendered through `capture:` when it is HTML/a
URL; run as a script otherwise.'
attributes:
panel_key:
name: panel_key
annotations:
collection_key:
tag: collection_key
value: true
description: Mosaic label this panel binds to (matches a letter in Figure.layout).
from_schema: https://w3id.org/tvbo/figure
rank: 1000
key: true
owner: Panel
domain_of:
- Panel
range: string
required: true
kind:
name: kind
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: PanelKind
required: true
number_loc:
name: number_loc
description: Per-panel override of the figure's panel_number_loc — e.g. wide top
panels upper-right, grid panels upper-left.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
range: Corner
number:
name: number
description: 'The panel letter to draw, overriding the mosaic key, or the string
''false'' to draw none. Needed whenever the paper''s panels do not map one-to-one
onto mosaic cells: a row of five mode surfaces under a single (a), or a schematic
cell that carries no letter of its own. Without it a grouped figure numbers
every cell and its letters stop matching the paper''s.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
range: string
placeholder:
name: placeholder
description: Honest-placeholder text drawn when this panel's data is missing or
degenerate (never a source-replot). Setting it wraps the draw so a missing container
falls back to this label instead of erroring.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
range: string
layers:
name: layers
description: Marks sharing this panel's axes (overlay). Grammar kinds only.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: Layer
multivalued: true
inlined: true
inlined_as_list: true
path:
name: path
description: External image file (image kind).
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
- File
- DataSource
- CodeSource
- ArchiveConfig
range: string
render:
name: render
description: Name of a registered custom-panel callable fn(container, ax, **opts)
(custom kind).
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: string
opts:
name: opts
description: 'The keyword options of a `custom` callable, and of the kinds that
carry their own option family — a `surface`/`volume`/`network` panel''s geometry,
a colorbar''s. No part of how an axis is DRAWN belongs here: the labels, limits,
scales, shape and legend are slots on the panel itself, the tick family sits
beside them, and `rules`, `regions` and `camera` carry the marks that travel
with a colour. The renderer refuses a retired name here rather than passing
it into the emitted script, and names the slot that replaced it.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
- Style
range: Argument
multivalued: true
inlined: true
tick_size:
name: tick_size
description: Tick-label size in points, overriding the figure's `font_size` for
this panel's ticks alone.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
tick_length:
name: tick_length
description: Length of this panel's tick marks in points, overriding the theme's.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
- Theme
range: float
tick_prune:
name: tick_prune
description: Drop the first, last, or both end ticks, for the case where a corner
tick collides with its neighbour panel's.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: TickPrune
nbins:
name: nbins
description: Upper bound on the number of ticks per axis. The lever to reach for
when a dense mosaic runs its numbers together.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: integer
xticks:
name: xticks
description: The x tick positions, stated outright. Unset lets the locator choose
them.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
multivalued: true
yticks:
name: yticks
description: The y tick positions, stated outright.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
multivalued: true
hide_xticklabels:
name: hide_xticklabels
description: 'Draw the x ticks without their numbers. Declare `share_x` on the
figure alongside it: hiding the numbers alone asserts a shared scale the axes
may not have, and a reader then compares two panels drawn at different ranges.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: boolean
hide_yticklabels:
name: hide_yticklabels
description: Draw the y ticks without their numbers. Same rule as `hide_xticklabels`,
with `share_y`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: boolean
xtick_rotation:
name: xtick_rotation
description: 'Rotate the x tick labels, in degrees counter-clockwise. Worth reaching
for when a dense row would otherwise run its numbers together: a slanted label
is anchored at its tick rather than centred under it, so it costs width it would
otherwise steal from its neighbour.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
ytick_rotation:
name: ytick_rotation
description: Rotate the y tick labels, in degrees counter-clockwise.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
xtick_format:
name: xtick_format
description: 'How x tick numbers are written: `sci` forces scientific notation,
`plain` forbids it.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: TickFormat
ytick_format:
name: ytick_format
description: How y tick numbers are written.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: TickFormat
xtick_side:
name: xtick_side
description: Which edge the x ticks sit on.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: AxisSide
ytick_side:
name: ytick_side
description: Which edge the y ticks sit on.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: AxisSide
xlabel:
name: xlabel
description: 'The x axis label, as the figure prints it — unit included, LaTeX
included. Unset leaves the renderer''s own, which is the encoded field''s bare
name: right for a working figure, wrong for a printed one.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: string
ylabel:
name: ylabel
description: The y axis label. See `xlabel`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: string
zlabel:
name: zlabel
description: The depth axis label of a 3-D panel. Ignored by every flat kind.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: string
title:
name: title
description: A heading above the panel, in the panel's own words. A panel LETTER
is not a title — that is `number`, which the layout places and sizes to the
journal's convention.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
- Legend
- Study
range: string
xlabel_pad:
name: xlabel_pad
description: Gap in points between the x axis label and its tick numbers, for
where the default lets the two touch. Unset takes the theme's `label_pad`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
ylabel_pad:
name: ylabel_pad
description: Gap in points between the y axis label and its tick numbers. See
`xlabel_pad`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
zlabel_pad:
name: zlabel_pad
description: Gap in points between the z axis label and its tick numbers. See
`xlabel_pad`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
xlabel_side:
name: xlabel_side
description: Which edge the x axis LABEL sits on. The tick numbers stay where
`xtick_side` puts them, so a label can cross to the far side of a panel whose
ticks do not follow it.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: AxisSide
ylabel_side:
name: ylabel_side
description: Which edge the y axis LABEL sits on. See `xlabel_side`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: AxisSide
xlim:
name: xlim
description: The x range, `[min, max]`. Declared rather than inferred, because
two panels a figure asks the reader to compare must not end up on whatever ranges
their own data happened to reach.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
multivalued: true
ylim:
name: ylim
description: The y range, `[min, max]`. See `xlim`.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
multivalued: true
zlim:
name: zlim
description: The depth range of a 3-D panel, `[min, max]`. Ignored by every flat
kind.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
multivalued: true
xscale:
name: xscale
description: How the x axis maps values to distance.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: AxisScale
yscale:
name: yscale
description: How the y axis maps values to distance.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: AxisScale
aspect:
name: aspect
description: 'The DATA aspect ratio: `equal` — one unit of x is one unit of y,
what a matrix or a spatial map needs — or `auto` to fill the cell, or a number.
`box_aspect` shapes the frame instead.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
- Colorbar
range: string
any_of:
- range: string
- range: float
box_aspect:
name: box_aspect
description: 'The frame''s height over its width, independent of the data ranges:
a square panel over data that is not square. `aspect` constrains the data instead.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: float
invert_x:
name: invert_x
description: Draw the x axis descending.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: boolean
invert_y:
name: invert_y
description: Draw the y axis descending — the matrix convention, row 0 at the
top.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: boolean
invert_z:
name: invert_z
description: Draw the depth axis of a 3-D panel descending.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: boolean
frame:
name: frame
description: 'Whether the panel keeps its frame and its ticks. `false` strips
both, for a panel with no measurable axis: an image, a schematic, a connectivity
matrix shown as a picture. Unset keeps them.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
- Layer
- Legend
range: boolean
legend:
name: legend
description: 'A key for this panel''s own marks. `legend: true` draws it wherever
the backend finds room, `legend: upper right` fixes the corner, and the object
form states the rest — frame, columns, title. All three are one slot, so a panel
that starts with a corner and later needs two columns keeps the word it had.
Distinct from `kind: legend`, a standalone legend PANEL that occupies a cell
of its own.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: Legend
inlined: true
any_of:
- range: Legend
- range: boolean
- range: string
colorbar:
name: colorbar
description: The colour scale printed beside this panel's field.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: Colorbar
inlined: true
surface:
name: surface
description: 'Geometry and colour scale of a `kind: surface` panel. Ignored by
every other kind.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: Surface
inlined: true
volume:
name: volume
description: 'Geometry and colour scale of a `kind: volume` panel. Ignored by
every other kind.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: Volume
inlined: true
network:
name: network
description: 'Graph and colour scale of a `kind: network` panel. Ignored by every
other kind.'
from_schema: https://w3id.org/tvbo/figure
owner: Panel
domain_of:
- Subject
- Session
- Panel
- Inset
- SimulationExperiment
range: Graph
inlined: true
grid:
name: grid
description: 'How a `kind: grid` panel tiles its cells. Ignored by every other
kind.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: Grid
inlined: true
fill_cell:
name: fill_cell
description: Keep the position the layout engine gave this panel, rather than
letting a later pass move it. For a panel whose position carries meaning — aligned
with the one above it, or sized to match a sibling.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: boolean
triangle_gap:
name: triangle_gap
description: Cells of blank left along the diagonal between two `triangle` layers,
so the two halves of a split matrix read as two quantities rather than one image.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: integer
rules:
name: rules
description: 'Straight reference lines drawn across the panel: a zero, a threshold,
the identity line of a target-versus-simulated plot. Each carries its own colour
and dash, so a rule and the way it is drawn cannot be stated apart.'
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: Rule
multivalued: true
inlined: true
inlined_as_list: true
regions:
name: regions
description: Rectangles ringing the windows this panel calls out — the parameter
band a regime lives in, the interval a statistic was taken over.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
- Stimulus
range: Region
multivalued: true
inlined: true
inlined_as_list: true
camera:
name: camera
description: Viewpoint for a 3-D panel or a surface. Ignored by every flat kind.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: Camera
inlined: true
annotations:
name: annotations
description: Positioned text labels drawn on the panel (e.g. 'K≈272') — a declarative
alternative to a custom callable.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
- Inset
range: Annotation
multivalued: true
inlined: true
inlined_as_list: true
insets:
name: insets
description: Sub-axes drawn inside this panel after its own body — the zoom windows,
corner thumbnails and small key maps papers place over a plot. Declaring them
keeps a panel that needs one from becoming a custom callable, which would take
its whole interior out of the grammar.
from_schema: https://w3id.org/tvbo/figure
rank: 1000
owner: Panel
domain_of:
- Panel
range: Inset
multivalued: true
inlined: true
inlined_as_list: true
label:
name: label
from_schema: https://w3id.org/tvbo
rank: 1000
slot_uri: rdfs:label
owner: Panel
domain_of:
- ParcellationTerminology
- Subject
- Session
- Dataset
- Contact
- SoftwareEnvironment
- Figure
- Panel
- Inset
- Layer
- Colorbar
- Rule
- Equation
- Stimulus
- Event
- Parcellation
- Tractogram
- Matrix
- Phenotype
- Network
- Node
- Edge
- Observation
- Dynamics
- StateVariable
- Parameter
- Function
- FunctionCall
- DerivedVariable
- RandomStream
- DataSource
- OptimizationStage
- Exploration
- ExplorationAxis
- FreeParameter
- Inference
- AlgorithmStage
- TuningObjective
- Continuation
- Coupling
- RegionMapping
- SimulationExperiment
- SimulationStudy
- TimeSeries
- NDArray
- SpatialDomain
- Mesh
- SpatialField
- FieldStateVariable
- DifferentialOperator
- BoundaryCondition
- PDESolver
- PDE
range: string
description:
name: description
description: The authored interpretive clause for this panel — the one part of
its caption a human writes. The caption composer merges it with the structural
descriptor it derives from the panel's layers (axis quantities/units, model/experiment,
transform), so the sentence a reader sees is authored intent over computed fact
and cannot drift when panels move or layers change.
from_schema: https://w3id.org/tvbo
rank: 1000
slot_uri: dcterms:description
owner: Panel
domain_of:
- CommonCoordinateSpace
- Dataset
- StudyLayout
- StudyTemplate
- StudyDirectory
- StudyFile
- ClinicalScore
- SoftwarePackage
- SoftwareRequirement
- SoftwareEnvironment
- Figure
- Panel
- Equation
- Stimulus
- Event
- Tractogram
- Matrix
- ResultEntity
- Activity
- Phenotype
- MeasureSpec
- NamedArray
- Network
- GraphGenerator
- ProcedureStep
- File
- Node
- Edge
- Observation
- Dynamics
- StateVariable
- Parameter
- CouplingInput
- Argument
- Function
- FunctionCall
- Callable
- DerivedParameter
- DerivedVariable
- RandomStream
- DataSource
- OptimizationStage
- Exploration
- ExplorationAxis
- FreeParameter
- Inference
- Prior
- Likelihood
- UpdateRule
- AlgorithmStage
- TuningObjective
- Algorithm
- BranchSwitch
- Continuation
- Integrator
- Coupling
- RegionMapping
- SimulationExperiment
- Study
- ResultBinding
- TimeSeries
- NDArray
- SpatialDomain
- Mesh
- SpatialField
- FieldStateVariable
- BoundaryCondition
- PDESolver
- PDE
- Reducer
range: string
cell:
name: cell
description: 'What every cell of a `grid` is: the kind they all draw, and the
opts they share. Each entry in `layers:` then fills one cell with this template,
which is why a grid of twenty surfaces needs the surface declared once. Its
`bounds` stay unset — the grid positions its cells.'
from_schema: https://w3id.org/tvbo/figure
owner: Panel
domain_of:
- Panel
- Inset
range: Inset
inlined: true
cells:
name: cells
description: A `grid`'s cells stated one at a time, for a grid whose cells differ
— a first cell showing the bare mesh the rest are maps on, or a row pairing
two kinds. Each is merged over `cell:`, and carries its own layers. Mutually
exclusive with `layers:`, which is the compact form of the same thing.
from_schema: https://w3id.org/tvbo/figure
owner: Panel
domain_of:
- Panel
- Inset
range: Inset
multivalued: true
inlined: true
inlined_as_list: true
source:
name: source
description: 'For an `image` panel, the producing artifact its committed `path`
is rendered FROM: a committed HTML/SVG file, a producing script, or a URL. `path`
stays the placed output; `source` is what regenerates it deterministically,
so a schematic or a live-platform view is provenance-tracked rather than an
opaque binary pasted into the repo. Rendered through `capture:` when it is HTML/a
URL; run as a script otherwise.'
from_schema: https://w3id.org/tvbo
rank: 1000
slot_uri: dcterms:source
owner: Panel
domain_of:
- Panel
- Edge
- Observation
- Dynamics
- Parameter
- CouplingInput
- Likelihood
- ResultBinding
range: string
capture:
name: capture
description: 'How to turn an `image` panel''s HTML/URL `source` into its `path`:
the headless-browser recipe (viewport, scale, wait, clip). The declarative form
of code/capture-screenshots.py, so a screenshot regenerates from the spec instead
of being hand-captured. Ignored when `source` is a static file or a script.'
from_schema: https://w3id.org/tvbo/figure
owner: Panel
domain_of:
- Panel
range: RenderSpec
inlined: true