classDiagram
class FieldStateVariable
click FieldStateVariable href "./FieldStateVariable.html"
StateVariable <|-- FieldStateVariable
click StateVariable href "./StateVariable.html"
FieldStateVariable : boundaries
FieldStateVariable --> "0..1" Range : boundaries
click Range href "./Range.html"
FieldStateVariable : boundary_conditions
FieldStateVariable --> "*" BoundaryCondition : boundary_conditions
click BoundaryCondition href "./BoundaryCondition.html"
FieldStateVariable : coupling_variable
FieldStateVariable --> "0..1" Boolean : coupling_variable
click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
FieldStateVariable : definition
FieldStateVariable --> "0..1" String : definition
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
FieldStateVariable : description
FieldStateVariable --> "0..1" String : description
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
FieldStateVariable : domain
FieldStateVariable --> "0..1" Range : domain
click Range href "./Range.html"
FieldStateVariable : equation
FieldStateVariable --> "0..1" Equation : equation
click Equation href "./Equation.html"
FieldStateVariable : history
FieldStateVariable --> "0..1" TimeSeries : history
click TimeSeries href "./TimeSeries.html"
FieldStateVariable : initial_value
FieldStateVariable --> "0..1" Float : initial_value
click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
FieldStateVariable : label
FieldStateVariable --> "0..1" String : label
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
FieldStateVariable : mesh
FieldStateVariable --> "0..1" Mesh : mesh
click Mesh href "./Mesh.html"
FieldStateVariable : name
FieldStateVariable --> "1" String : name
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
FieldStateVariable : noise
FieldStateVariable --> "0..1" Noise : noise
click Noise href "./Noise.html"
FieldStateVariable : stimulation_variable
FieldStateVariable --> "0..1" Boolean : stimulation_variable
click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
FieldStateVariable : symbol
FieldStateVariable --> "0..1" String : symbol
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
FieldStateVariable : unit
FieldStateVariable --> "0..1" String : unit
click String href "../http://www.w3.org/2001/XMLSchema#string.html"
FieldStateVariable : variable_of_interest
FieldStateVariable --> "0..1" Boolean : variable_of_interest
click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
Class: FieldStateVariable
URI: tvbo:class/FieldStateVariable
Inheritance
- StateVariable
- FieldStateVariable
Slots
| Name | Cardinality and Range | Description | Inheritance |
|---|---|---|---|
| label | 0..1 xsd:string |
direct | |
| description | 0..1 xsd:string |
direct | |
| mesh | 0..1 Mesh |
direct | |
| boundary_conditions | * BoundaryCondition |
direct | |
| name | 1 xsd:string |
StateVariable | |
| symbol | 0..1 xsd:string |
StateVariable | |
| definition | 0..1 xsd:string |
StateVariable | |
| domain | 0..1 Range |
StateVariable | |
| equation | 0..1 Equation |
StateVariable | |
| unit | 0..1 xsd:string |
StateVariable | |
| variable_of_interest | 0..1 xsd:boolean |
StateVariable | |
| coupling_variable | 0..1 xsd:boolean |
StateVariable | |
| noise | 0..1 Noise |
StateVariable | |
| stimulation_variable | 0..1 xsd:boolean |
StateVariable | |
| boundaries | 0..1 Range |
StateVariable | |
| initial_value | 0..1 xsd:float |
StateVariable | |
| history | 0..1 TimeSeries |
StateVariable |
Usages
| used by | used in | type | used |
|---|---|---|---|
| PDE | state_variables | range | FieldStateVariable |
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/tvbo
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | tvbo:FieldStateVariable |
| native | tvbo:FieldStateVariable |
LinkML Source
Direct
name: FieldStateVariable
from_schema: https://w3id.org/tvbo
is_a: StateVariable
slots:
- label
- description
attributes:
mesh:
name: mesh
from_schema: https://w3id.org/tvbo
domain_of:
- SpatialField
- FieldStateVariable
- PDE
range: Mesh
boundary_conditions:
name: boundary_conditions
from_schema: https://w3id.org/tvbo
rank: 1000
domain_of:
- FieldStateVariable
- PDE
range: BoundaryCondition
multivalued: trueInduced
name: FieldStateVariable
from_schema: https://w3id.org/tvbo
is_a: StateVariable
attributes:
mesh:
name: mesh
from_schema: https://w3id.org/tvbo
alias: mesh
owner: FieldStateVariable
domain_of:
- SpatialField
- FieldStateVariable
- PDE
range: Mesh
boundary_conditions:
name: boundary_conditions
from_schema: https://w3id.org/tvbo
rank: 1000
alias: boundary_conditions
owner: FieldStateVariable
domain_of:
- FieldStateVariable
- PDE
range: BoundaryCondition
multivalued: true
label:
name: label
from_schema: https://w3id.org/tvbo
rank: 1000
alias: label
owner: FieldStateVariable
domain_of:
- ParcellationTerminology
- Dataset
- Contact
- Equation
- Stimulus
- Parcellation
- Tractogram
- Matrix
- Network
- Node
- Edge
- Observation
- Dynamics
- StateVariable
- Parameter
- Function
- DerivedVariable
- RandomStream
- DataSource
- OptimizationStage
- Exploration
- TuningObjective
- Coupling
- RegionMapping
- SimulationExperiment
- SimulationStudy
- TimeSeries
- SoftwareEnvironment
- NDArray
- SpatialDomain
- Mesh
- SpatialField
- FieldStateVariable
- DifferentialOperator
- BoundaryCondition
- PDESolver
- PDE
range: string
description:
name: description
from_schema: https://w3id.org/tvbo
rank: 1000
alias: description
owner: FieldStateVariable
domain_of:
- ClinicalScore
- Equation
- Stimulus
- Tractogram
- Matrix
- Network
- File
- Node
- Edge
- Observation
- Dynamics
- StateVariable
- Parameter
- CouplingInput
- Argument
- Function
- Callable
- DerivedParameter
- DerivedVariable
- RandomStream
- DataSource
- OptimizationStage
- Exploration
- UpdateRule
- TuningObjective
- Algorithm
- Integrator
- Coupling
- RegionMapping
- SimulationExperiment
- SimulationStudy
- TimeSeries
- SoftwareEnvironment
- SoftwareRequirement
- SoftwarePackage
- NDArray
- SpatialDomain
- Mesh
- SpatialField
- FieldStateVariable
- BoundaryCondition
- PDESolver
- PDE
range: string
name:
name: name
from_schema: https://w3id.org/tvbo
rank: 1000
key: true
alias: name
owner: FieldStateVariable
domain_of:
- BrainAtlas
- CommonCoordinateSpace
- ParcellationEntity
- DBSProtocol
- ClinicalScale
- ClinicalScore
- Tractogram
- File
- Observation
- Dynamics
- StateVariable
- Distribution
- Parameter
- CouplingInput
- Argument
- Function
- Callable
- DerivedParameter
- DerivedVariable
- DataSource
- OptimizationStage
- Exploration
- UpdateRule
- Algorithm
- Coupling
- SoftwareEnvironment
- SoftwareRequirement
- SoftwarePackage
range: string
required: true
symbol:
name: symbol
from_schema: https://w3id.org/tvbo
rank: 1000
alias: symbol
owner: FieldStateVariable
domain_of:
- StateVariable
- Parameter
- DerivedParameter
- DerivedVariable
range: string
definition:
name: definition
from_schema: https://w3id.org/tvbo
rank: 1000
alias: definition
owner: FieldStateVariable
domain_of:
- Equation
- StateVariable
- Parameter
- Function
- DifferentialOperator
range: string
domain:
name: domain
from_schema: https://w3id.org/tvbo
rank: 1000
alias: domain
owner: FieldStateVariable
domain_of:
- ClinicalScale
- ClinicalScore
- StateVariable
- Parameter
- PDE
range: Range
equation:
name: equation
from_schema: https://w3id.org/tvbo
rank: 1000
slot_uri: tvbo:Equation
alias: equation
owner: FieldStateVariable
domain_of:
- Stimulus
- Observation
- StateVariable
- Distribution
- Parameter
- Function
- Case
- DerivedParameter
- DerivedVariable
- Noise
- UpdateRule
- DifferentialOperator
range: Equation
inlined: true
unit:
name: unit
from_schema: https://w3id.org/tvbo
rank: 1000
alias: unit
owner: FieldStateVariable
domain_of:
- CommonCoordinateSpace
- StateVariable
- Parameter
- Argument
- DerivedParameter
- DerivedVariable
- Integrator
- TimeSeries
- NDArray
- SpatialField
range: string
variable_of_interest:
name: variable_of_interest
from_schema: https://w3id.org/tvbo
rank: 1000
ifabsent: 'True'
alias: variable_of_interest
owner: FieldStateVariable
domain_of:
- StateVariable
range: boolean
coupling_variable:
name: coupling_variable
from_schema: https://w3id.org/tvbo
rank: 1000
ifabsent: 'False'
alias: coupling_variable
owner: FieldStateVariable
domain_of:
- StateVariable
range: boolean
noise:
name: noise
from_schema: https://w3id.org/tvbo
rank: 1000
alias: noise
owner: FieldStateVariable
domain_of:
- StateVariable
- Integrator
range: Noise
inlined: true
stimulation_variable:
name: stimulation_variable
from_schema: https://w3id.org/tvbo
rank: 1000
alias: stimulation_variable
owner: FieldStateVariable
domain_of:
- StateVariable
range: boolean
boundaries:
name: boundaries
from_schema: https://w3id.org/tvbo
rank: 1000
alias: boundaries
owner: FieldStateVariable
domain_of:
- StateVariable
range: Range
inlined: true
initial_value:
name: initial_value
from_schema: https://w3id.org/tvbo
rank: 1000
ifabsent: float(0.1)
alias: initial_value
owner: FieldStateVariable
domain_of:
- StateVariable
- SpatialField
range: float
history:
name: history
from_schema: https://w3id.org/tvbo
rank: 1000
alias: history
owner: FieldStateVariable
domain_of:
- StateVariable
range: TimeSeries
inlined: true