Class: Prior

Prior belief over one inferred parameter. In Inference.priors the collection KEY is the parameter’s dotted name; the value wraps a Distribution as the belief (reusing the standard distribution vocabulary rather than inventing a new one). Distinct from Parameter.distribution, which specifies per-node SAMPLING, not a prior.

URI: tvbo:Prior

 classDiagram
    class Prior
    click Prior href "./Prior.html"
      Prior : description
        
          
    
        
        
        Prior --> "0..1" String : description
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Prior : distribution
        
          
    
        
        
        Prior --> "1" Distribution : distribution
        click Distribution href "./Distribution.html"
    

        
      Prior : name
        
          
    
        
        
        Prior --> "1" String : name
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      

Class Properties

Property	Value
Class URI	tvbo:Prior

Slots

Name	Cardinality and Range	Description	Inheritance
name	1 xsd:string	Globally unique identifier for the entity	direct
description	0..1 xsd:string		direct
distribution	1 Distribution	The prior distribution: e	direct

Usages

used by	used in	type	used
Inference	priors	range	Prior

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/tvbo

Mappings

Mapping Type	Mapped Value
self	tvbo:Prior
native	tvbo:Prior

LinkML Source

Direct

name: Prior
description: Prior belief over one inferred parameter. In `Inference.priors` the collection
  KEY is the parameter's dotted name; the value wraps a `Distribution` as the belief
  (reusing the standard distribution vocabulary rather than inventing a new one).
  Distinct from `Parameter.distribution`, which specifies per-node SAMPLING, not a
  prior.
from_schema: https://w3id.org/tvbo
slots:
- name
- description
attributes:
  distribution:
    name: distribution
    description: 'The prior distribution: e.g. {name: Normal, parameters: {mean, std}}
      or {name: Uniform, domain: {lo, hi}}.'
    from_schema: https://w3id.org/tvbo
    domain_of:
    - StateVariable
    - Parameter
    - Noise
    - Prior
    - Coupling
    range: Distribution
    required: true
    inlined: true
class_uri: tvbo:Prior

Induced

name: Prior
description: Prior belief over one inferred parameter. In `Inference.priors` the collection
  KEY is the parameter's dotted name; the value wraps a `Distribution` as the belief
  (reusing the standard distribution vocabulary rather than inventing a new one).
  Distinct from `Parameter.distribution`, which specifies per-node SAMPLING, not a
  prior.
from_schema: https://w3id.org/tvbo
attributes:
  distribution:
    name: distribution
    description: 'The prior distribution: e.g. {name: Normal, parameters: {mean, std}}
      or {name: Uniform, domain: {lo, hi}}.'
    from_schema: https://w3id.org/tvbo
    owner: Prior
    domain_of:
    - StateVariable
    - Parameter
    - Noise
    - Prior
    - Coupling
    range: Distribution
    required: true
    inlined: true
  name:
    name: name
    description: Globally unique identifier for the entity.
    from_schema: https://w3id.org/tvbo/common
    slot_uri: schema:name
    identifier: true
    owner: Prior
    domain_of:
    - BrainAtlas
    - CommonCoordinateSpace
    - ParcellationEntity
    - DBSProtocol
    - ClinicalScale
    - ClinicalScore
    - SoftwarePackage
    - SoftwareRequirement
    - SoftwareEnvironment
    - Event
    - Tractogram
    - MeasureSpec
    - NamedArray
    - GraphGenerator
    - Binding
    - ProcedureStep
    - File
    - StateValue
    - Observation
    - Dynamics
    - StateVariable
    - Distribution
    - Parameter
    - CouplingInput
    - Argument
    - Function
    - FunctionCall
    - Callable
    - DerivedParameter
    - DerivedVariable
    - DataSource
    - OptimizationStage
    - Exploration
    - Inference
    - Prior
    - Likelihood
    - UpdateRule
    - Algorithm
    - Option
    - BranchSwitch
    - Continuation
    - Coupling
    range: string
    required: true
  description:
    name: description
    from_schema: https://w3id.org/tvbo
    rank: 1000
    slot_uri: dcterms:description
    owner: Prior
    domain_of:
    - Dataset
    - ClinicalScore
    - SoftwarePackage
    - SoftwareRequirement
    - SoftwareEnvironment
    - Equation
    - Stimulus
    - Event
    - Tractogram
    - Matrix
    - Phenotype
    - MeasureSpec
    - NamedArray
    - Network
    - GraphGenerator
    - ProcedureStep
    - File
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - CouplingInput
    - Argument
    - Function
    - FunctionCall
    - Callable
    - DerivedParameter
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - ExplorationAxis
    - FreeParameter
    - Inference
    - Prior
    - Likelihood
    - UpdateRule
    - AlgorithmStage
    - TuningObjective
    - Algorithm
    - BranchSwitch
    - Continuation
    - Integrator
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - Study
    - TimeSeries
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
class_uri: tvbo:Prior