Class: Parameter

URI: tvbo:Parameter

 classDiagram
    class Parameter
    click Parameter href "./Parameter.html"
      Parameter <|-- DerivedParameter
        click DerivedParameter href "./DerivedParameter.html"
      
      Parameter : comment
        
          
    
        
        
        Parameter --> "0..1" String : comment
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Parameter : default
        
          
    
        
        
        Parameter --> "0..1" String : default
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Parameter : definition
        
          
    
        
        
        Parameter --> "0..1" String : definition
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Parameter : description
        
          
    
        
        
        Parameter --> "0..1" String : description
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Parameter : domain
        
          
    
        
        
        Parameter --> "0..1" Range : domain
        click Range href "./Range.html"
    

        
      Parameter : equation
        
          
    
        
        
        Parameter --> "0..1" Equation : equation
        click Equation href "./Equation.html"
    

        
      Parameter : explored_values
        
          
    
        
        
        Parameter --> "*" Float : explored_values
        click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
    

        
      Parameter : free
        
          
    
        
        
        Parameter --> "0..1" Boolean : free
        click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
    

        
      Parameter : heterogeneous
        
          
    
        
        
        Parameter --> "0..1" Boolean : heterogeneous
        click Boolean href "../http://www.w3.org/2001/XMLSchema#boolean.html"
    

        
      Parameter : label
        
          
    
        
        
        Parameter --> "0..1" String : label
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Parameter : name
        
          
    
        
        
        Parameter --> "1" String : name
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Parameter : reported_optimum
        
          
    
        
        
        Parameter --> "0..1" Float : reported_optimum
        click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
    

        
      Parameter : shape
        
          
    
        
        
        Parameter --> "0..1" String : shape
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Parameter : symbol
        
          
    
        
        
        Parameter --> "0..1" String : symbol
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Parameter : unit
        
          
    
        
        
        Parameter --> "0..1" String : unit
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      Parameter : value
        
          
    
        
        
        Parameter --> "0..1" Float : value
        click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
    

        
      

Inheritance

• Parameter
  • DerivedParameter

Slots

Name	Cardinality and Range	Description	Inheritance
name	1 xsd:string		direct
label	0..1 xsd:string		direct
symbol	0..1 xsd:string		direct
definition	0..1 xsd:string		direct
value	0..1 xsd:float		direct
default	0..1 xsd:string		direct
domain	0..1 Range		direct
reported_optimum	0..1 xsd:float		direct
description	0..1 xsd:string		direct
equation	0..1 Equation		direct
unit	0..1 xsd:string		direct
comment	0..1 xsd:string		direct
heterogeneous	0..1 xsd:boolean		direct
free	0..1 xsd:boolean		direct
shape	0..1 xsd:string		direct
explored_values	* xsd:float		direct

Usages

used by	used in	type	used
StimulationSetting	amplitude	range	Parameter
StimulationSetting	frequency	range	Parameter
StimulationSetting	pulse_width	range	Parameter
Equation	parameters	range	Parameter
Stimulus	parameters	range	Parameter
TemporalApplicableEquation	parameters	range	Parameter
Network	global_coupling_strength	range	Parameter
Network	conduction_speed	range	Parameter
Node	parameters	range	Parameter
Edge	parameters	range	Parameter
Observation	parameters	range	Parameter
DerivedObservation	parameters	range	Parameter
Dynamics	parameters	range	Parameter
Dynamics	coupling_terms	range	Parameter
Dynamics	local_coupling_term	range	Parameter
Distribution	parameters	range	Parameter
Distribution	dependencies	range	Parameter
Noise	parameters	range	Parameter
Noise	intensity	range	Parameter
OptimizationStage	free_parameters	range	Parameter
OptimizationStage	hyperparameters	range	Parameter
OptimizationStage	freeze_parameters	range	Parameter
Optimization	free_parameters	range	Parameter
Optimization	hyperparameters	range	Parameter
Optimization	freeze_parameters	range	Parameter
Exploration	parameters	range	Parameter
UpdateRule	target_parameter	range	Parameter
AlgorithmInclude	arguments	range	Parameter
Algorithm	hyperparameters	range	Parameter
Integrator	parameters	range	Parameter
Coupling	parameters	range	Parameter
DifferentialOperator	coefficient	range	Parameter
DifferentialOperator	tensor_coefficient	range	Parameter
PDE	parameters	range	Parameter

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/tvbo

Mappings

Mapping Type	Mapped Value
self	tvbo:Parameter
native	tvbo:Parameter

LinkML Source

Direct

name: Parameter
from_schema: https://w3id.org/tvbo
slots:
- name
- label
- symbol
- definition
- value
- default
- domain
- reported_optimum
- description
- equation
- unit
attributes:
  comment:
    name: comment
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - Parameter
    range: string
  heterogeneous:
    name: heterogeneous
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - Parameter
    range: boolean
  free:
    name: free
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - Parameter
    range: boolean
  shape:
    name: shape
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - Parameter
    - NDArray
    range: string
  explored_values:
    name: explored_values
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - Parameter
    range: float
    multivalued: true
class_uri: tvbo:Parameter

Induced

name: Parameter
from_schema: https://w3id.org/tvbo
attributes:
  comment:
    name: comment
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: comment
    owner: Parameter
    domain_of:
    - Parameter
    range: string
  heterogeneous:
    name: heterogeneous
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: heterogeneous
    owner: Parameter
    domain_of:
    - Parameter
    range: boolean
  free:
    name: free
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: free
    owner: Parameter
    domain_of:
    - Parameter
    range: boolean
  shape:
    name: shape
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: shape
    owner: Parameter
    domain_of:
    - Parameter
    - NDArray
    range: string
  explored_values:
    name: explored_values
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: explored_values
    owner: Parameter
    domain_of:
    - Parameter
    range: float
    multivalued: true
  name:
    name: name
    from_schema: https://w3id.org/tvbo
    rank: 1000
    key: true
    alias: name
    owner: Parameter
    domain_of:
    - BrainAtlas
    - CommonCoordinateSpace
    - ParcellationEntity
    - DBSProtocol
    - ClinicalScale
    - ClinicalScore
    - Tractogram
    - File
    - Observation
    - Dynamics
    - StateVariable
    - Distribution
    - Parameter
    - CouplingInput
    - Argument
    - Function
    - Callable
    - DerivedParameter
    - DerivedVariable
    - DataSource
    - OptimizationStage
    - Exploration
    - UpdateRule
    - Algorithm
    - Coupling
    - SoftwareEnvironment
    - SoftwareRequirement
    - SoftwarePackage
    range: string
    required: true
  label:
    name: label
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: label
    owner: Parameter
    domain_of:
    - ParcellationTerminology
    - Dataset
    - Contact
    - Equation
    - Stimulus
    - Parcellation
    - Tractogram
    - Matrix
    - Network
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - Function
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - TuningObjective
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - SimulationStudy
    - TimeSeries
    - SoftwareEnvironment
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - DifferentialOperator
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
  symbol:
    name: symbol
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: symbol
    owner: Parameter
    domain_of:
    - StateVariable
    - Parameter
    - DerivedParameter
    - DerivedVariable
    range: string
  definition:
    name: definition
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: definition
    owner: Parameter
    domain_of:
    - Equation
    - StateVariable
    - Parameter
    - Function
    - DifferentialOperator
    range: string
  value:
    name: value
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: value
    owner: Parameter
    domain_of:
    - Parameter
    - Argument
    - BoundaryCondition
    range: float
  default:
    name: default
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: default
    owner: Parameter
    domain_of:
    - Parameter
    range: string
  domain:
    name: domain
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: domain
    owner: Parameter
    domain_of:
    - ClinicalScale
    - ClinicalScore
    - StateVariable
    - Parameter
    - PDE
    range: Range
  reported_optimum:
    name: reported_optimum
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: reported_optimum
    owner: Parameter
    domain_of:
    - Parameter
    range: float
  description:
    name: description
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: description
    owner: Parameter
    domain_of:
    - ClinicalScore
    - Equation
    - Stimulus
    - Tractogram
    - Matrix
    - Network
    - File
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - CouplingInput
    - Argument
    - Function
    - Callable
    - DerivedParameter
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - UpdateRule
    - TuningObjective
    - Algorithm
    - Integrator
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - SimulationStudy
    - TimeSeries
    - SoftwareEnvironment
    - SoftwareRequirement
    - SoftwarePackage
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
  equation:
    name: equation
    from_schema: https://w3id.org/tvbo
    rank: 1000
    slot_uri: tvbo:Equation
    alias: equation
    owner: Parameter
    domain_of:
    - Stimulus
    - Observation
    - StateVariable
    - Distribution
    - Parameter
    - Function
    - Case
    - DerivedParameter
    - DerivedVariable
    - Noise
    - UpdateRule
    - DifferentialOperator
    range: Equation
    inlined: true
  unit:
    name: unit
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: unit
    owner: Parameter
    domain_of:
    - CommonCoordinateSpace
    - StateVariable
    - Parameter
    - Argument
    - DerivedParameter
    - DerivedVariable
    - Integrator
    - TimeSeries
    - NDArray
    - SpatialField
    range: string
class_uri: tvbo:Parameter