Class: DBSSubject

Human or animal subject receiving DBS.

URI: tvbo_dbs:class/DBSSubject

 classDiagram
    class DBSSubject
    click DBSSubject href "./DBSSubject.html"
      Subject <|-- DBSSubject
        click Subject href "./Subject.html"
      
      DBSSubject : age
        
          
    
        
        
        DBSSubject --> "0..1" Float : age
        click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
    

        
      DBSSubject : coordinate_space
        
          
    
        
        
        DBSSubject --> "0..1" CommonCoordinateSpace : coordinate_space
        click CommonCoordinateSpace href "./CommonCoordinateSpace.html"
    

        
      DBSSubject : diagnosis
        
          
    
        
        
        DBSSubject --> "0..1" String : diagnosis
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      DBSSubject : group
        
          
    
        
        
        DBSSubject --> "0..1" String : group
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      DBSSubject : handedness
        
          
    
        
        
        DBSSubject --> "0..1" String : handedness
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      DBSSubject : label
        
          
    
        
        
        DBSSubject --> "0..1" String : label
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      DBSSubject : metadata
        
          
    
        
        
        DBSSubject --> "0..1" String : metadata
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      DBSSubject : network
        
          
    
        
        
        DBSSubject --> "0..1" String : network
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      DBSSubject : protocols
        
          
    
        
        
        DBSSubject --> "*" DBSProtocol : protocols
        click DBSProtocol href "./DBSProtocol.html"
    

        
      DBSSubject : sessions
        
          
    
        
        
        DBSSubject --> "*" Session : sessions
        click Session href "./Session.html"
    

        
      DBSSubject : sex
        
          
    
        
        
        DBSSubject --> "0..1" SexEnum : sex
        click SexEnum href "../../enums/SexEnum.html"
    

        
      DBSSubject : subject_id
        
          
    
        
        
        DBSSubject --> "1" String : subject_id
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      

Inheritance

• Subject
  • DBSSubject

Slots

Name	Cardinality and Range	Description	Inheritance
diagnosis	0..1 xsd:string		direct
handedness	0..1 xsd:string		direct
protocols	* DBSProtocol	All DBS protocols assigned to this subject	direct
coordinate_space	0..1 CommonCoordinateSpace	Coordinate space used for this subject’s data	direct
subject_id	1 xsd:string	BIDS-compatible subject identifier (without ‘sub-’ prefix)	Subject
label	0..1 xsd:string	Human-readable label for the subject	Subject
group	0..1 xsd:string	Group assignment (e	Subject
age	0..1 xsd:float	Age at time of study (years)	Subject
sex	0..1 SexEnum	Biological sex	Subject
sessions	* Session	Data collection sessions for this subject	Subject
network	0..1 xsd:string	Path to subject-specific connectome (when not session-dependent)	Subject
metadata	0..1 xsd:string	Additional subject metadata as key-value pairs or path to a sidecar JSON file	Subject

Usages

used by	used in	type	used
DBSDataset	subjects	range	DBSSubject

Identifier and Mapping Information

Schema Source

• from schema: http://www.thevirtualbrain.org/tvbo/dbs

Mappings

Mapping Type	Mapped Value
self	tvbo_dbs:DBSSubject
native	tvbo_dbs:DBSSubject

LinkML Source

Direct

name: DBSSubject
description: Human or animal subject receiving DBS.
from_schema: http://www.thevirtualbrain.org/tvbo/dbs
is_a: Subject
attributes:
  diagnosis:
    name: diagnosis
    from_schema: http://www.thevirtualbrain.org/tvbo/dbs
    rank: 1000
    domain_of:
    - DBSSubject
    range: string
  handedness:
    name: handedness
    from_schema: http://www.thevirtualbrain.org/tvbo/dbs
    rank: 1000
    domain_of:
    - DBSSubject
    range: string
  protocols:
    name: protocols
    description: All DBS protocols assigned to this subject.
    from_schema: http://www.thevirtualbrain.org/tvbo/dbs
    rank: 1000
    domain_of:
    - DBSSubject
    range: DBSProtocol
    multivalued: true
  coordinate_space:
    name: coordinate_space
    description: Coordinate space used for this subject's data
    from_schema: http://www.thevirtualbrain.org/tvbo/dbs
    domain_of:
    - DBSDataset
    - DBSSubject
    - Electrode
    - EField
    - Network
    - SpatialDomain
    - Mesh
    range: CommonCoordinateSpace

Induced

name: DBSSubject
description: Human or animal subject receiving DBS.
from_schema: http://www.thevirtualbrain.org/tvbo/dbs
is_a: Subject
attributes:
  diagnosis:
    name: diagnosis
    from_schema: http://www.thevirtualbrain.org/tvbo/dbs
    rank: 1000
    alias: diagnosis
    owner: DBSSubject
    domain_of:
    - DBSSubject
    range: string
  handedness:
    name: handedness
    from_schema: http://www.thevirtualbrain.org/tvbo/dbs
    rank: 1000
    alias: handedness
    owner: DBSSubject
    domain_of:
    - DBSSubject
    range: string
  protocols:
    name: protocols
    description: All DBS protocols assigned to this subject.
    from_schema: http://www.thevirtualbrain.org/tvbo/dbs
    rank: 1000
    alias: protocols
    owner: DBSSubject
    domain_of:
    - DBSSubject
    range: DBSProtocol
    multivalued: true
  coordinate_space:
    name: coordinate_space
    description: Coordinate space used for this subject's data
    from_schema: http://www.thevirtualbrain.org/tvbo/dbs
    alias: coordinate_space
    owner: DBSSubject
    domain_of:
    - DBSDataset
    - DBSSubject
    - Electrode
    - EField
    - Network
    - SpatialDomain
    - Mesh
    range: CommonCoordinateSpace
  subject_id:
    name: subject_id
    description: 'BIDS-compatible subject identifier (without ''sub-'' prefix). Examples:
      ''01'', ''ctrl03'', ''patient17''.'
    from_schema: http://www.thevirtualbrain.org/tvbo/study
    exact_mappings:
    - schema:identifier
    identifier: true
    alias: subject_id
    owner: DBSSubject
    domain_of:
    - Subject
    - TimeSeries
    range: string
    required: true
  label:
    name: label
    description: Human-readable label for the subject.
    from_schema: http://www.thevirtualbrain.org/tvbo/study
    alias: label
    owner: DBSSubject
    domain_of:
    - ParcellationTerminology
    - Subject
    - Session
    - Dataset
    - Contact
    - SoftwareEnvironment
    - Equation
    - Stimulus
    - Event
    - Parcellation
    - Tractogram
    - Matrix
    - Network
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - Function
    - FunctionCall
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - TuningObjective
    - Continuation
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - SimulationStudy
    - TimeSeries
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - DifferentialOperator
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
  group:
    name: group
    description: Group assignment (e.g., 'control', 'patient', 'healthy'). Maps to
      participants.tsv 'group' column in BIDS.
    from_schema: http://www.thevirtualbrain.org/tvbo/study
    rank: 1000
    alias: group
    owner: DBSSubject
    domain_of:
    - Subject
    range: string
  age:
    name: age
    description: Age at time of study (years).
    from_schema: http://www.thevirtualbrain.org/tvbo/study
    rank: 1000
    alias: age
    owner: DBSSubject
    domain_of:
    - Subject
    range: float
  sex:
    name: sex
    description: Biological sex.
    from_schema: http://www.thevirtualbrain.org/tvbo/study
    rank: 1000
    alias: sex
    owner: DBSSubject
    domain_of:
    - Subject
    range: SexEnum
  sessions:
    name: sessions
    description: Data collection sessions for this subject. Each session can have
      its own network, empirical data, and conditions.
    from_schema: http://www.thevirtualbrain.org/tvbo/study
    rank: 1000
    alias: sessions
    owner: DBSSubject
    domain_of:
    - Subject
    range: Session
    multivalued: true
    inlined: true
  network:
    name: network
    description: Path to subject-specific connectome (when not session-dependent).
      Relative to dataset root or BIDS derivatives. For session-specific networks,
      use Session.network instead.
    from_schema: http://www.thevirtualbrain.org/tvbo/study
    rank: 1000
    alias: network
    owner: DBSSubject
    domain_of:
    - Subject
    - Session
    - SimulationExperiment
    range: string
  metadata:
    name: metadata
    description: Additional subject metadata as key-value pairs or path to a sidecar
      JSON file.
    from_schema: http://www.thevirtualbrain.org/tvbo/study
    rank: 1000
    alias: metadata
    owner: DBSSubject
    domain_of:
    - Subject
    range: string