Class: BrainAtlas

A schema for representing a version of a brain atlas.

URI: atom:atlas/Atlas

 classDiagram
    class BrainAtlas
    click BrainAtlas href "./BrainAtlas.html"
      BrainAtlas : abbreviation
        
          
    
        
        
        BrainAtlas --> "0..1" String : abbreviation
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      BrainAtlas : author
        
          
    
        
        
        BrainAtlas --> "*" String : author
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      BrainAtlas : coordinateSpace
        
          
    
        
        
        BrainAtlas --> "0..1" CommonCoordinateSpace : coordinateSpace
        click CommonCoordinateSpace href "./CommonCoordinateSpace.html"
    

        
      BrainAtlas : isVersionOf
        
          
    
        
        
        BrainAtlas --> "0..1" String : isVersionOf
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      BrainAtlas : name
        
          
    
        
        
        BrainAtlas --> "1" String : name
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      BrainAtlas : terminology
        
          
    
        
        
        BrainAtlas --> "0..1" ParcellationTerminology : terminology
        click ParcellationTerminology href "./ParcellationTerminology.html"
    

        
      BrainAtlas : versionIdentifier
        
          
    
        
        
        BrainAtlas --> "0..1" String : versionIdentifier
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      

Slots

Name	Cardinality and Range	Description	Inheritance
coordinateSpace	0..1 CommonCoordinateSpace	Add the common coordinate space used for this brain atlas version	direct
name	0..1 xsd:string		direct
abbreviation	0..1 xsd:string	Slot for the abbreviation of a resource	direct
author	* xsd:string		direct
isVersionOf	0..1 xsd:string	Linked type for the version of a brain atlas or coordinate space	direct
versionIdentifier	0..1 xsd:string	Enter the version identifier of this brain atlas or coordinate space version	direct
terminology	0..1 ParcellationTerminology	Add the parcellation terminology version used for this brain atlas version	direct

Usages

used by	used in	type	used
Parcellation	atlas	range	BrainAtlas

Identifier and Mapping Information

Schema Source

• from schema: https://openminds.ebrains.eu/sands/BrainAtlas

Mappings

Mapping Type	Mapped Value
self	atom:atlas/Atlas
native	atom:BrainAtlas

LinkML Source

Direct

name: BrainAtlas
description: A schema for representing a version of a brain atlas.
from_schema: https://openminds.ebrains.eu/sands/BrainAtlas
slots:
- coordinateSpace
- name
- abbreviation
- author
- isVersionOf
- versionIdentifier
attributes:
  terminology:
    name: terminology
    description: Add the parcellation terminology version used for this brain atlas
      version.
    from_schema: https://openminds.ebrains.eu/sands/BrainAtlas
    rank: 1000
    domain_of:
    - BrainAtlas
    range: ParcellationTerminology
class_uri: atom:atlas/Atlas

Induced

name: BrainAtlas
description: A schema for representing a version of a brain atlas.
from_schema: https://openminds.ebrains.eu/sands/BrainAtlas
attributes:
  terminology:
    name: terminology
    description: Add the parcellation terminology version used for this brain atlas
      version.
    from_schema: https://openminds.ebrains.eu/sands/BrainAtlas
    rank: 1000
    alias: terminology
    owner: BrainAtlas
    domain_of:
    - BrainAtlas
    range: ParcellationTerminology
  coordinateSpace:
    name: coordinateSpace
    description: Add the common coordinate space used for this brain atlas version.
    from_schema: https://openminds.ebrains.eu/sands/BrainAtlas
    alias: coordinateSpace
    owner: BrainAtlas
    domain_of:
    - Coordinate
    - BrainAtlas
    range: CommonCoordinateSpace
  name:
    name: name
    from_schema: https://w3id.org/tvbo
    rank: 1000
    key: true
    alias: name
    owner: BrainAtlas
    domain_of:
    - BrainAtlas
    - CommonCoordinateSpace
    - ParcellationEntity
    - DBSProtocol
    - ClinicalScale
    - ClinicalScore
    - Tractogram
    - File
    - Observation
    - Dynamics
    - StateVariable
    - Distribution
    - Parameter
    - CouplingInput
    - Argument
    - Function
    - Callable
    - DerivedParameter
    - DerivedVariable
    - DataSource
    - OptimizationStage
    - Exploration
    - UpdateRule
    - Algorithm
    - Coupling
    - SoftwareEnvironment
    - SoftwareRequirement
    - SoftwarePackage
    range: string
    required: true
  abbreviation:
    name: abbreviation
    description: Slot for the abbreviation of a resource.
    from_schema: https://openminds.ebrains.eu/sands/BrainAtlas
    alias: abbreviation
    owner: BrainAtlas
    domain_of:
    - BrainAtlas
    - CommonCoordinateSpace
    - ParcellationEntity
    range: string
  author:
    name: author
    from_schema: https://openminds.ebrains.eu/sands/BrainAtlas
    alias: author
    owner: BrainAtlas
    domain_of:
    - BrainAtlas
    range: string
    multivalued: true
  isVersionOf:
    name: isVersionOf
    description: Linked type for the version of a brain atlas or coordinate space.
    from_schema: https://openminds.ebrains.eu/sands/BrainAtlas
    alias: isVersionOf
    owner: BrainAtlas
    domain_of:
    - BrainAtlas
    union_of:
    - BrainAtlas
    - CommonCoordinateSpace
    - ParcellationTerminology
    - ParcellationEntity
    range: string
  versionIdentifier:
    name: versionIdentifier
    description: Enter the version identifier of this brain atlas or coordinate space
      version.
    from_schema: https://openminds.ebrains.eu/sands/BrainAtlas
    alias: versionIdentifier
    owner: BrainAtlas
    domain_of:
    - BrainAtlas
    - ParcellationEntity
    - ParcellationTerminology
    range: string
class_uri: atom:atlas/Atlas