Class: RegionMapping

Maps vertices to parent regions for hierarchical/aggregated coupling

URI: tvbo:class/RegionMapping

 classDiagram
    class RegionMapping
    click RegionMapping href "./RegionMapping.html"
      RegionMapping : dataLocation
        
          
    
        
        
        RegionMapping --> "0..1" String : dataLocation
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      RegionMapping : description
        
          
    
        
        
        RegionMapping --> "0..1" String : description
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      RegionMapping : label
        
          
    
        
        
        RegionMapping --> "0..1" String : label
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      RegionMapping : n_regions
        
          
    
        
        
        RegionMapping --> "0..1" Integer : n_regions
        click Integer href "../http://www.w3.org/2001/XMLSchema#integer.html"
    

        
      RegionMapping : n_vertices
        
          
    
        
        
        RegionMapping --> "0..1" Integer : n_vertices
        click Integer href "../http://www.w3.org/2001/XMLSchema#integer.html"
    

        
      RegionMapping : vertex_to_region
        
          
    
        
        
        RegionMapping --> "*" Integer : vertex_to_region
        click Integer href "../http://www.w3.org/2001/XMLSchema#integer.html"
    

        
      

Slots

Name	Cardinality and Range	Description	Inheritance
label	0..1 xsd:string		direct
description	0..1 xsd:string		direct
dataLocation	0..1 xsd:string	Add the location of the data file containing the parcellation terminology	direct
vertex_to_region	* xsd:integer	Array mapping each vertex index to its parent region index	direct
n_vertices	0..1 xsd:integer	Total number of vertices	direct
n_regions	0..1 xsd:integer	Total number of regions	direct

Usages

used by	used in	type	used
Coupling	region_mapping	range	RegionMapping

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/tvbo

Mappings

Mapping Type	Mapped Value
self	tvbo:RegionMapping
native	tvbo:RegionMapping

LinkML Source

Direct

name: RegionMapping
description: Maps vertices to parent regions for hierarchical/aggregated coupling
from_schema: https://w3id.org/tvbo
slots:
- label
- description
- dataLocation
attributes:
  vertex_to_region:
    name: vertex_to_region
    description: Array mapping each vertex index to its parent region index. Can use
      dataLocation instead for large arrays.
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - RegionMapping
    range: integer
    multivalued: true
  n_vertices:
    name: n_vertices
    description: Total number of vertices
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - RegionMapping
    range: integer
  n_regions:
    name: n_regions
    description: Total number of regions
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - RegionMapping
    range: integer

Induced

name: RegionMapping
description: Maps vertices to parent regions for hierarchical/aggregated coupling
from_schema: https://w3id.org/tvbo
attributes:
  vertex_to_region:
    name: vertex_to_region
    description: Array mapping each vertex index to its parent region index. Can use
      dataLocation instead for large arrays.
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: vertex_to_region
    owner: RegionMapping
    domain_of:
    - RegionMapping
    range: integer
    multivalued: true
  n_vertices:
    name: n_vertices
    description: Total number of vertices
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: n_vertices
    owner: RegionMapping
    domain_of:
    - RegionMapping
    range: integer
  n_regions:
    name: n_regions
    description: Total number of regions
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: n_regions
    owner: RegionMapping
    domain_of:
    - RegionMapping
    range: integer
  label:
    name: label
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: label
    owner: RegionMapping
    domain_of:
    - ParcellationTerminology
    - Dataset
    - Contact
    - Equation
    - Stimulus
    - Parcellation
    - Tractogram
    - Matrix
    - Network
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - Function
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - TuningObjective
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - SimulationStudy
    - TimeSeries
    - SoftwareEnvironment
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - DifferentialOperator
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
  description:
    name: description
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: description
    owner: RegionMapping
    domain_of:
    - ClinicalScore
    - Equation
    - Stimulus
    - Tractogram
    - Matrix
    - Network
    - File
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - CouplingInput
    - Argument
    - Function
    - Callable
    - DerivedParameter
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - UpdateRule
    - TuningObjective
    - Algorithm
    - Integrator
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - SimulationStudy
    - TimeSeries
    - SoftwareEnvironment
    - SoftwareRequirement
    - SoftwarePackage
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
  dataLocation:
    name: dataLocation
    description: Add the location of the data file containing the parcellation terminology.
    from_schema: https://openminds.ebrains.eu/sands/BrainAtlas
    alias: dataLocation
    owner: RegionMapping
    domain_of:
    - ParcellationTerminology
    - Stimulus
    - Matrix
    - RandomStream
    - RegionMapping
    - TimeSeries
    - SoftwareEnvironment
    - SoftwareRequirement
    - NDArray
    - Mesh
    range: string