Class: TuningObjective

Defines what the tuning algorithm optimizes for. Can be an activity target (FIC) or a connectivity target (EIB).

URI: tvbo:class/TuningObjective

 classDiagram
    class TuningObjective
    click TuningObjective href "./TuningObjective.html"
      TuningObjective : description
        
          
    
        
        
        TuningObjective --> "0..1" String : description
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      TuningObjective : label
        
          
    
        
        
        TuningObjective --> "0..1" String : label
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      TuningObjective : metric
        
          
    
        
        
        TuningObjective --> "0..1" Equation : metric
        click Equation href "./Equation.html"
    

        
      TuningObjective : target_data
        
          
    
        
        
        TuningObjective --> "0..1" Observation : target_data
        click Observation href "./Observation.html"
    

        
      TuningObjective : target_value
        
          
    
        
        
        TuningObjective --> "0..1" Float : target_value
        click Float href "../http://www.w3.org/2001/XMLSchema#float.html"
    

        
      TuningObjective : target_variable
        
          
    
        
        
        TuningObjective --> "0..1" StateVariable : target_variable
        click StateVariable href "./StateVariable.html"
    

        
      TuningObjective : type
        
          
    
        
        
        TuningObjective --> "0..1" String : type
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      

Slots

Name	Cardinality and Range	Description	Inheritance
label	0..1 xsd:string		direct
description	0..1 xsd:string		direct
type	0..1 xsd:string	Type of objective: ‘activity_target’, ‘fc_matching’, ‘custom’	direct
target_variable	0..1 StateVariable	State variable for activity targets (e	direct
target_value	0..1 xsd:float	Target value for activity objectives	direct
target_data	0..1 Observation	Reference to empirical data observation for matching objectives	direct
metric	0..1 Equation	Metric equation for matching (e	direct

Usages

used by	used in	type	used
Algorithm	objective	range	TuningObjective

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/tvbo

Mappings

Mapping Type	Mapped Value
self	tvbo:TuningObjective
native	tvbo:TuningObjective

LinkML Source

Direct

name: TuningObjective
description: Defines what the tuning algorithm optimizes for. Can be an activity target
  (FIC) or a connectivity target (EIB).
from_schema: https://w3id.org/tvbo
slots:
- label
- description
attributes:
  type:
    name: type
    description: 'Type of objective: ''activity_target'', ''fc_matching'', ''custom'''
    from_schema: https://w3id.org/tvbo
    domain_of:
    - File
    - Aggregation
    - TuningObjective
    - Algorithm
    range: string
  target_variable:
    name: target_variable
    description: State variable for activity targets (e.g., S_e)
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - TuningObjective
    range: StateVariable
    inlined: false
  target_value:
    name: target_value
    description: Target value for activity objectives
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - TuningObjective
    range: float
  target_data:
    name: target_data
    description: Reference to empirical data observation for matching objectives
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - TuningObjective
    range: Observation
    inlined: false
  metric:
    name: metric
    description: Metric equation for matching (e.g., correlation, rmse)
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - TuningObjective
    range: Equation
    inlined: true

Induced

name: TuningObjective
description: Defines what the tuning algorithm optimizes for. Can be an activity target
  (FIC) or a connectivity target (EIB).
from_schema: https://w3id.org/tvbo
attributes:
  type:
    name: type
    description: 'Type of objective: ''activity_target'', ''fc_matching'', ''custom'''
    from_schema: https://w3id.org/tvbo
    alias: type
    owner: TuningObjective
    domain_of:
    - File
    - Aggregation
    - TuningObjective
    - Algorithm
    range: string
  target_variable:
    name: target_variable
    description: State variable for activity targets (e.g., S_e)
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: target_variable
    owner: TuningObjective
    domain_of:
    - TuningObjective
    range: StateVariable
    inlined: false
  target_value:
    name: target_value
    description: Target value for activity objectives
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: target_value
    owner: TuningObjective
    domain_of:
    - TuningObjective
    range: float
  target_data:
    name: target_data
    description: Reference to empirical data observation for matching objectives
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: target_data
    owner: TuningObjective
    domain_of:
    - TuningObjective
    range: Observation
    inlined: false
  metric:
    name: metric
    description: Metric equation for matching (e.g., correlation, rmse)
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: metric
    owner: TuningObjective
    domain_of:
    - TuningObjective
    range: Equation
    inlined: true
  label:
    name: label
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: label
    owner: TuningObjective
    domain_of:
    - ParcellationTerminology
    - Dataset
    - Contact
    - Equation
    - Stimulus
    - Parcellation
    - Tractogram
    - Matrix
    - Network
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - Function
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - TuningObjective
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - SimulationStudy
    - TimeSeries
    - SoftwareEnvironment
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - DifferentialOperator
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
  description:
    name: description
    from_schema: https://w3id.org/tvbo
    rank: 1000
    alias: description
    owner: TuningObjective
    domain_of:
    - ClinicalScore
    - Equation
    - Stimulus
    - Tractogram
    - Matrix
    - Network
    - File
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - CouplingInput
    - Argument
    - Function
    - Callable
    - DerivedParameter
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - UpdateRule
    - TuningObjective
    - Algorithm
    - Integrator
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - SimulationStudy
    - TimeSeries
    - SoftwareEnvironment
    - SoftwareRequirement
    - SoftwarePackage
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string