Slot: description

URI: tvbo:slot/description Alias: description

Applicable Classes

Name Description Modifies Slot
ClinicalScore Metadata about a clinical score or scale no
Event A discrete or continuous event that modifies the system during simulation no
FieldStateVariable no
BranchSwitch Specification for switching from a detected bifurcation point to a new branch… no
NDArray no
SoftwarePackage Identity information about a software package independent of a specific versi… no
Tractogram Reference to tractography/diffusion MRI data used to derive structural connec… no
Mesh no
Equation no
Parameter no
DerivedVariable no
Coupling no
Exploration Parameter space exploration (grid search, sweep) no
Network Network specification with nodes, edges, and reusable coupling configurations no
OptimizationStage A single stage in a multi-stage optimization workflow no
Optimization Configuration for parameter optimization no
RandomStream no
UpdateRule Defines how a parameter is updated based on observables no
RegionMapping Maps vertices to parent regions for hierarchical/aggregated coupling no
DataSource Specification for loading external/empirical data no
DerivedParameter no
FunctionCall Invocation of a function in a pipeline no
Matrix Adjacency matrix of a network no
Observation Unified class for all observation/measurement specifications no
StateVariable no
LossFunction A loss function for optimization with optional aggregation no
SoftwareEnvironment no
CouplingInput Specification of a coupling input channel for multi-coupling dynamics no
Algorithm A complete specification of an iterative parameter tuning algorithm no
SimulationStudy no
Argument A function argument with explicit value specification no
Edge An edge in a network no
BoundaryCondition no
Continuation Complete specification of a numerical continuation / bifurcation analysis no
DerivedObservation Observation derived from one or more other observations no
SimulationExperiment no
Dynamics no
GraphGenerator Backend-agnostic graph generator specification no
Callable no
Stimulus no
PDESolver no
SpatialDomain no
TemporalApplicableEquation no
Function A function with explicit input -> transformation -> output flow no
Integrator Fixed-step or adaptive ODE integrator with TVB-specific extensions (noise, tr… no
TimeSeries Time series data from simulations or measurements no
TuningObjective Defines what the tuning algorithm optimizes for no
PDE Partial differential equation problem definition no
SoftwareRequirement no
ClassReference Reference to a class that can be instantiated and called no
Node A node in a network with its own dynamics and properties no
SpatialField no
File no

Properties

Type and Range

Property Value
Range xsd:string
Domain Of ClinicalScore, Equation, Stimulus, Event, Tractogram, Matrix, Network, GraphGenerator, File, Node, Edge, Observation, Dynamics, StateVariable, Parameter, CouplingInput, Argument, Function, FunctionCall, Callable, DerivedParameter, DerivedVariable, RandomStream, DataSource, OptimizationStage, Exploration, UpdateRule, TuningObjective, Algorithm, BranchSwitch, Continuation, Integrator, Coupling, RegionMapping, SimulationExperiment, SimulationStudy, TimeSeries, SoftwareEnvironment, SoftwareRequirement, SoftwarePackage, NDArray, SpatialDomain, Mesh, SpatialField, FieldStateVariable, BoundaryCondition, PDESolver, PDE

Cardinality and Requirements

Property Value

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/tvbo

Mappings

Mapping Type Mapped Value
self tvbo:description
native tvbo:description

LinkML Source

name: description
from_schema: https://w3id.org/tvbo
rank: 1000
alias: description
domain_of:
- ClinicalScore
- Equation
- Stimulus
- Event
- Tractogram
- Matrix
- Network
- GraphGenerator
- File
- Node
- Edge
- Observation
- Dynamics
- StateVariable
- Parameter
- CouplingInput
- Argument
- Function
- FunctionCall
- Callable
- DerivedParameter
- DerivedVariable
- RandomStream
- DataSource
- OptimizationStage
- Exploration
- UpdateRule
- TuningObjective
- Algorithm
- BranchSwitch
- Continuation
- Integrator
- Coupling
- RegionMapping
- SimulationExperiment
- SimulationStudy
- TimeSeries
- SoftwareEnvironment
- SoftwareRequirement
- SoftwarePackage
- NDArray
- SpatialDomain
- Mesh
- SpatialField
- FieldStateVariable
- BoundaryCondition
- PDESolver
- PDE
range: string