Class: AlgorithmStage

One stage of a multi-stage tuning schedule. The algorithm body is run once per stage, in order, carrying the trajectory state, FC window buffer, and monitors forward — so the stages form one continuous online tuning run. Each stage overrides n_iterations and selected hyperparameters (e.g. Schirner 2023’s 6 stages: eta halves and the FC window doubles per stage, sharpening the per-edge gradient over time).

URI: tvbo:AlgorithmStage

 classDiagram
    class AlgorithmStage
    click AlgorithmStage href "./AlgorithmStage.html"
      AlgorithmStage : arguments
        
          
    
        
        
        AlgorithmStage --> "*" Parameter : arguments
        click Parameter href "./Parameter.html"
    

        
      AlgorithmStage : description
        
          
    
        
        
        AlgorithmStage --> "0..1" String : description
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      AlgorithmStage : label
        
          
    
        
        
        AlgorithmStage --> "0..1" String : label
        click String href "../http://www.w3.org/2001/XMLSchema#string.html"
    

        
      AlgorithmStage : n_iterations
        
          
    
        
        
        AlgorithmStage --> "1" Integer : n_iterations
        click Integer href "../http://www.w3.org/2001/XMLSchema#integer.html"
    

        
      

Class Properties

Property	Value
Class URI	tvbo:AlgorithmStage

Slots

Name	Cardinality and Range	Description	Inheritance
label	0..1 xsd:string		direct
description	0..1 xsd:string		direct
n_iterations	1 xsd:integer	Number of outer iterations to run in this stage	direct
arguments	* Parameter	Hyperparameter overrides for this stage (e	direct

Usages

used by	used in	type	used
Algorithm	stages	range	AlgorithmStage

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/tvbo

Mappings

Mapping Type	Mapped Value
self	tvbo:AlgorithmStage
native	tvbo:AlgorithmStage

LinkML Source

Direct

name: AlgorithmStage
description: 'One stage of a multi-stage tuning schedule. The algorithm body is run
  once per stage, in order, carrying the trajectory state, FC window buffer, and monitors
  forward — so the stages form one continuous online tuning run. Each stage overrides
  n_iterations and selected hyperparameters (e.g. Schirner 2023''s 6 stages: eta halves
  and the FC window doubles per stage, sharpening the per-edge gradient over time).'
from_schema: https://w3id.org/tvbo
slots:
- label
- description
attributes:
  n_iterations:
    name: n_iterations
    description: Number of outer iterations to run in this stage.
    from_schema: https://w3id.org/tvbo
    rank: 1000
    domain_of:
    - AlgorithmStage
    - Algorithm
    range: integer
    required: true
  arguments:
    name: arguments
    description: Hyperparameter overrides for this stage (e.g. eta, window_size).
      Names not listed fall back to the algorithm's own hyperparameter defaults.
    from_schema: https://w3id.org/tvbo
    domain_of:
    - Function
    - FunctionCall
    - AlgorithmInclude
    - AlgorithmStage
    range: Parameter
    multivalued: true
    inlined: true
    inlined_as_list: true
class_uri: tvbo:AlgorithmStage

Induced

name: AlgorithmStage
description: 'One stage of a multi-stage tuning schedule. The algorithm body is run
  once per stage, in order, carrying the trajectory state, FC window buffer, and monitors
  forward — so the stages form one continuous online tuning run. Each stage overrides
  n_iterations and selected hyperparameters (e.g. Schirner 2023''s 6 stages: eta halves
  and the FC window doubles per stage, sharpening the per-edge gradient over time).'
from_schema: https://w3id.org/tvbo
attributes:
  n_iterations:
    name: n_iterations
    description: Number of outer iterations to run in this stage.
    from_schema: https://w3id.org/tvbo
    rank: 1000
    owner: AlgorithmStage
    domain_of:
    - AlgorithmStage
    - Algorithm
    range: integer
    required: true
  arguments:
    name: arguments
    description: Hyperparameter overrides for this stage (e.g. eta, window_size).
      Names not listed fall back to the algorithm's own hyperparameter defaults.
    from_schema: https://w3id.org/tvbo
    owner: AlgorithmStage
    domain_of:
    - Function
    - FunctionCall
    - AlgorithmInclude
    - AlgorithmStage
    range: Parameter
    multivalued: true
    inlined: true
    inlined_as_list: true
  label:
    name: label
    from_schema: https://w3id.org/tvbo
    rank: 1000
    slot_uri: rdfs:label
    owner: AlgorithmStage
    domain_of:
    - ParcellationTerminology
    - Subject
    - Session
    - Dataset
    - Contact
    - SoftwareEnvironment
    - Equation
    - Stimulus
    - Event
    - Parcellation
    - Tractogram
    - Matrix
    - Phenotype
    - Network
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - Function
    - FunctionCall
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - ExplorationAxis
    - FreeParameter
    - Inference
    - AlgorithmStage
    - TuningObjective
    - Continuation
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - SimulationStudy
    - TimeSeries
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - DifferentialOperator
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
  description:
    name: description
    from_schema: https://w3id.org/tvbo
    rank: 1000
    slot_uri: dcterms:description
    owner: AlgorithmStage
    domain_of:
    - Dataset
    - ClinicalScore
    - SoftwarePackage
    - SoftwareRequirement
    - SoftwareEnvironment
    - Equation
    - Stimulus
    - Event
    - Tractogram
    - Matrix
    - Phenotype
    - MeasureSpec
    - NamedArray
    - Network
    - GraphGenerator
    - ProcedureStep
    - File
    - Node
    - Edge
    - Observation
    - Dynamics
    - StateVariable
    - Parameter
    - CouplingInput
    - Argument
    - Function
    - FunctionCall
    - Callable
    - DerivedParameter
    - DerivedVariable
    - RandomStream
    - DataSource
    - OptimizationStage
    - Exploration
    - ExplorationAxis
    - FreeParameter
    - Inference
    - Prior
    - Likelihood
    - UpdateRule
    - AlgorithmStage
    - TuningObjective
    - Algorithm
    - BranchSwitch
    - Continuation
    - Integrator
    - Coupling
    - RegionMapping
    - SimulationExperiment
    - Study
    - TimeSeries
    - NDArray
    - SpatialDomain
    - Mesh
    - SpatialField
    - FieldStateVariable
    - BoundaryCondition
    - PDESolver
    - PDE
    range: string
class_uri: tvbo:AlgorithmStage